14772 AAT_I superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
14772 chr_22 AAT_I superfamily 396015 398489 - AAT_I superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0041

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0005
 0.39

Most Highly Correlated Transcripts

270222

0.9008

bd190

(bd190) SrmB
0.8348

28100

DHBP_synthase
0.8282

268062

PRK14293
0.8223

13551

Uup
0.8153

9247

hypothetical protein
0.8038

41892

PtrB
0.8002

4424

LabA_like
0.7976

268364

UPF0051
0.7975

268271

PRK10867
0.7975

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAT_I superfamily Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent... - 248.449 3.07E-75 243 - 606 superfamily 267298

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 157509 Not available 463637 Cre01.g028423.t1.2 AT4G28680.1 496942

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006520 GO:0016831 GO:0004351 -

GO:0006520

cellular amino acid metabolic process

Details: 
The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
GO Category: 
BP

GO:0016831

carboxy-lyase activity

Details: 
Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound.
GO Category: 
MF

GO:0004351

glutamate decarboxylase activity

Details: 
Catalysis of the reaction: L-glutamate = 4-aminobutanoate + CO2.
GO Category: 
MF

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