1479 Alpha_kinaseThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
1479	chr_1	Alpha_kinase	1623010	1625497	-	Alpha_kinase

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442922	Thaps1479.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0248

Most Highly Correlated Transcripts

8384 hypothetical protein 0.8656	5574 SufI 0.8648	263610 COG3899 0.8634	4672 hypothetical protein 0.8593	3719 DECH_helic 0.8535	22897 UBP12 0.8455
4047 hypothetical protein 0.8421	11261 WD40 superfamily 0.8412	21234 hypothetical protein 0.8406	5788 TFIIS_M 0.8369

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Alpha_kinase		Alpha-kinase family; This family is a novel family of eukaryotic protein kinase catalytic domains,...	cl03728	135.946	3.84E-36	576 - 810	specific	214828
Alpha_kinase superfamily		Alpha-kinase family; This family is a novel family of eukaryotic protein kinase catalytic domains,...	-	135.946	3.84E-36	576 - 810	superfamily	261852

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_48792	PHATRDRAFT_48792	252670	Not available	Not available	Cre03.g156650.t1.1	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0004674 GO:0005524 GO:0006468 -

Add comment

Log in to post comments