ThpsCt005 (trnF(gaa)) Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
ThpsCt005	chloroplast	(trnF(gaa))	23394	23466	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
4524744	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0255

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0052	0.43	12000 16

Most Highly Correlated Transcripts

bd1545 (bd1545) psbC 0.8463	bd1339 (bd1339) psaD 0.8011	bd1313 (bd1313) psbH 0.8005	ThpsCt025 (trnL(uaa)) 0.7978	bd1287 (bd1287) PRK09281 0.7863	bd1243 (bd1243) rpl33 0.7827
bd1620 (bd1620) ThiG 0.7671	bd1350 (bd1350) psaF 0.7629	bd1013 (bd1013) PRX_Typ2cys 0.76	bd1720 (bd1720) ftsH 0.7514

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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