ThpsCt007 (trnT(ugu)) Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
ThpsCt007	chloroplast	(trnT(ugu))	49110	49181	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
4524742	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0061

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0052	0.43	12000 16

Most Highly Correlated Transcripts

bd1243 (bd1243) rpl33 0.8466	bd1013 (bd1013) PRX_Typ2cys 0.8355	bd1287 (bd1287) PRK09281 0.8276	bd1545 (bd1545) psbC 0.8011	bd93 (bd93) NA 0.7672	ThpsCt010 (trnD(guc)) 0.7607
ThpsCt014 (trnE(uuc)) 0.7529	bd1396 (bd1396) rpl19 0.7527	ThpsCt023 (trnQ(uug)) 0.7423	bd1435 (bd1435) ycf3 0.7409

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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