20877 Ubiq_cyt_C_chapThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
20877	chr_1	Ubiq_cyt_C_chap	1790130	1791735	+	Ubiq_cyt_C_chap

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443112	Thaps20877.2, Thaps20877.3, Thaps20877.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0241

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0233	0.34	0.000038 0.14

Most Highly Correlated Transcripts

8157 hypothetical protein 0.9329	261893 Ofd1_CTDD 0.9038	22163 hypothetical protein 0.8983	4372 hypothetical protein 0.8975	270004 hypothetical protein 0.8954	13378 PRK13762 0.8912
3314 hypothetical protein 0.8909	21305 hypothetical protein 0.8904	5806 TIM_phosphate_binding superfamily 0.8901	8270 ANK 0.8899

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Ubiq_cyt_C_chap		Ubiquinol-cytochrome C chaperone; Ubiquinol-cytochrome C chaperone.	cl12045	76.8916	5.42E-17	197 - 348	specific	252294
Ubiq_cyt_C_chap superfamily		Ubiquinol-cytochrome C chaperone; Ubiquinol-cytochrome C chaperone.	-	76.8916	5.42E-17	197 - 348	superfamily	264520

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_44692	PHATRDRAFT_44692	273606	318789	Not available	Not available	Not available	513194

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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