21847 NAD_binding_8 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21847 chr_3 NAD_binding_8 superfamily 1426042 1427981 - NAD_binding_8 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7441942 Thaps21847.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0296

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0036
 0.41

Most Highly Correlated Transcripts

263722

FIG superfamily
0.8773

12899

AAA
0.8717

268443

SAICAR_synt_Sc
0.848

24042

cytidine_deaminase-like superfamily
0.8443

bd1755

(bd1755) NA
0.8442

261577

(RecA_2) RecA-like_NTPases superfamily
0.842

6401

hypothetical protein
0.8388

263997

(APA1) Adaptin_N
0.8379

261481

FTO_NTD
0.8365

264184

PLN00049
0.8359

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NAD_binding_8 superfamily NAD(P)-binding Rossmann-like domain; NAD(P)-binding Rossmann-like domain. - 182.314 2.55E-50 71 - 610 superfamily 267487
COG1233 Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and... - 154.129 9.63E-41 66 - 610 multi-dom 224154

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_51868 PHATRDRAFT_51868 Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006118 GO:0016491 GO:0016117 GO:0016705 GO:0050660 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0016117

carotenoid biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail.
GO Category: 
BP

GO:0016705

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Details: 
Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.
GO Category: 
MF

GO:0050660

flavin adenine dinucleotide binding

Details: 
Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
GO Category: 
MF

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