22011 PqqL
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22011 chr_3 PqqL 2228102 2230161 - PqqL

Synonyms

NCBI ID Ensembl Genomes exon ID
7443806 Thaps22011.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0290

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0279
 0.39

Most Highly Correlated Transcripts

bd1360

(bd1360) ycf24
0.9067

bd1319

(bd1319) ycf16
0.8947

20621

hypothetical protein
0.8678

269710

NADB_Rossmann superfamily
0.8648

23762

CAF1 superfamily
0.8647

bd258

(bd258) HU
0.8623

bd1720

(bd1720) ftsH
0.8618

25011

hypothetical protein
0.8534

12899

AAA
0.8532

267979

HCO3_cotransp superfamily
0.8452

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_M16_C superfamily Peptidase M16 inactive domain; Peptidase M16 consists of two structurally related domains. One is... - 108.332 3.22E-27 282 - 480 superfamily 253075
Peptidase_M16_C superfamily Peptidase M16 inactive domain; Peptidase M16 consists of two structurally related domains. One is... - 108.332 3.22E-27 282 - 480 superfamily 253075
Peptidase_M16 superfamily Insulinase (Peptidase family M16); Insulinase (Peptidase family M16). - 71.958 9.10E-15 121 - 276 superfamily 250047
PqqL Predicted Zn-dependent peptidases [General function prediction only] - 173.415 8.05E-48 89 - 544 multi-dom 223685

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_15689 PHATRDRAFT_15689 208050 203321 443369 Not available Not available 320443

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004222 GO:0006508 GO:0004240 GO:0017087 -

GO:0004222

metalloendopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0004240

NA

Details: 
NA
GO Category: 
NA

GO:0017087

mitochondrial processing peptidase complex

Details: 
A protein complex that consists of a catalytic alpha subunit (alpha-MPP) and a regulatory beta subunit (beta-MPP), and catalyzes the release of N-terminal targeting peptides from precursor proteins imported into the mitochondrion.
GO Category: 
CC

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