23410 WD40 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23410 chr_7 WD40 superfamily 599488 603413 - WD40 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7448996 Thaps23410.1, Thaps23410.4, Thaps23410.3, Thaps23410.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0259

Most Highly Correlated Transcripts

16114

PLN02350
0.9237

37118

FeThRed_B
0.8973

269624

TIM_phosphate_binding superfamily
0.8932

1841

RRM1_U1A_like
0.8729

30533

Kin17_mid
0.8641

267979

HCO3_cotransp superfamily
0.864

32859

M18_DAP
0.8608

19158

GRX_PICOT_like
0.8581

13448

Sec1
0.8563

40200

TRX_reduct
0.8525

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 89.7016 1.48E-19 571 - 910 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 78.9771 2.21E-15 467 - 910 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49529 PHATRDRAFT_49529 257981 256100 463509 Cre04.g217750.t1.1 AT2G20330.1 344261

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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