24195 HA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24195 chr_10 HA 631123 633399 + HA

Synonyms

NCBI ID Ensembl Genomes exon ID
7446858 Thaps24195.4, Thaps24195.3, Thaps24195.1, Thaps24195.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0472

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0087
 0.32

Most Highly Correlated Transcripts

12899

AAA
0.9008

24235

Peptidase_C19 superfamily
0.885

16501

PKc_like superfamily
0.8736

21165

(Tp_TAF9) TAF9
0.8695

7973

hypothetical protein
0.8593

24925

3a01204
0.8556

2612

hypothetical protein
0.8542

10811

EEP superfamily
0.8534

20578

hypothetical protein
0.8463

23660

hypothetical protein
0.8359

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 58.4709 9.36E-11 335 - 392 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 58.4709 9.36E-11 335 - 392 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 58.4709 9.36E-11 335 - 392 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 58.4709 9.36E-11 335 - 392 superfamily 251968

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
40323 PHATRDRAFT_45516 PHATRDRAFT_45516 262606 164548 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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