10953 PAP2_C
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
10953 chr_18 PAP2_C 527684 529445 - PAP2_C

Synonyms

NCBI ID Ensembl Genomes exon ID
7444791 Thaps10953.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0398

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0024
 0.39

Most Highly Correlated Transcripts

bd624

(bd624) Glyco_transf_34 superfamily
0.9015

bd218

(bd218) Chloroa_b-bind superfamily
0.8987

bd1378

(bd1378) atpI
0.8879

bd1290

(bd1290) atpH
0.8833

bd672

(bd672) NA
0.8828

bd1766

(bd1766) NA
0.8813

bd1465

(bd1465) PKc_like superfamily
0.8745

bd598

(bd598) atpG
0.8726

bd1863

(bd1863) NA
0.8691

bd1318

(bd1318) atpF
0.8664

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PAP2_C superfamily PAP2 superfamily C-terminal; This family is closely related to the C-terminal a region of PAP2. - 74.9058 1.79E-16 422 - 490 superfamily 258532
PAP2_C superfamily PAP2 superfamily C-terminal; This family is closely related to the C-terminal a region of PAP2. - 74.9058 1.79E-16 422 - 490 superfamily 258532

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44661 PHATRDRAFT_44661 242631 300899 Not available Cre01.g033050.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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