261710 (STT3b) PMT_2 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261710 chr_3 (STT3b) PMT_2 superfamily 475136 478702 + PMT_2 superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0187

Most Highly Correlated Transcripts

bd687

(bd687) NA
0.8978

bd1078

(bd1078) NA
0.8832

263019

PLN02818
0.8808

bd1949

(bd1949) NA
0.8773

263610

COG3899
0.8708

261357

NAD_binding_8 superfamily
0.866

264023

RabGAP-TBC
0.8595

bd1893

(bd1893) NA
0.8591

263997

(APA1) Adaptin_N
0.8585

bd446

(bd446) HrpA
0.8578

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PMT_2 superfamily Dolichyl-phosphate-mannose-protein mannosyltransferase; This family contains members that are not... - 170.268 3.64E-45 81 - 478 superfamily 267511

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_55198 PHATRDRAFT_55198 169299 240422 249590 Not available AT1G34130.1 Not available

KEGG

KEGG description KEGG Pathway
Protein processing in endoplasmic reticulum map04141

GO Terms

GO:0004576 GO:0006486 GO:0016020 GO:0004579 -

GO:0004576

oligosaccharyl transferase activity

Details: 
Catalysis of the transfer of a oligosaccharyl group to an acceptor molecule, typically another carbohydrate or a lipid.
GO Category: 
MF

GO:0006486

protein glycosylation

Details: 
A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0004579

dolichyl-diphosphooligosaccharide-protein glycotransferase activity

Details: 
Catalysis of the reaction: dolichyl diphosphooligosaccharide + protein L-asparagine = dolichyl diphosphate + a glycoprotein with the oligosaccharide chain attached by glycosylamine linkage to protein L-asparagine.
GO Category: 
MF

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