1116 Methyltransf_16 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
1116	chr_1	Methyltransf_16 superfamily	711382	712061	-	Methyltransf_16 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449786	Thaps1116.3, Thaps1116.2, Thaps1116.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0008

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0244	0.36	0.00000032 0.014

Most Highly Correlated Transcripts

35464 Nth 0.8574	13393 PLN02321 0.8572	8806 hypothetical protein 0.8568	262977 NA 0.8518	25040 NA 0.8516	16075 tpt 0.8422
11801 Methyltrans_RNA superfamily 0.8406	41005 odpB 0.8395	268343 NA 0.8384	2874 FKBP_C 0.8376

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Methyltransf_16 superfamily		Putative methyltransferase; Putative methyltransferase.	-	81.2237	8.83E-20	36 - 126	superfamily	255884

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATR_44043	PHATR_44043	244088	Not available	98524	Not available	Not available	318381

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments