262361 GH16_fungal_KRE6_glucanaseThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
262361	chr_4	GH16_fungal_KRE6_glucanase	2392971	2394800	+	GH16_fungal_KRE6_glucanase

Synonyms

NCBI ID	Ensembl Genomes exon ID
7446713	Thaps262361.7, Thaps262361.2, Thaps262361.1, Thaps262361.6, Thaps262361.5, Thaps262361.4, Thaps262361.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0178

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0139	0.40	0.0028 1

Most Highly Correlated Transcripts

bd718 (bd718) PRK10387 0.8652	bd1474 (bd1474) phytoene_desat 0.8566	bd624 (bd624) Glyco_transf_34 superfamily 0.8427	260936 HCO3_cotransp superfamily 0.8424	17039 MmsB 0.838	bd687 (bd687) NA 0.8366
bd846 (bd846) NA 0.828	bd1161 (bd1161) NA 0.8267	34551 60KD_IMP 0.8263	17468 CK_II_beta 0.8236

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
GH16_fungal_KRE6_glucanase		Saccharomyces cerevisiae KRE6 and related glucanses, member of glycosyl hydrolase family 16; KRE6...	cl00218	426.341	3.57E-147	131 - 454	specific	185689
Glyco_hydrolase_16 superfamily		glycosyl hydrolase family 16; The O-Glycosyl hydrolases are a widespread group of enzymes that...	-	426.341	3.57E-147	131 - 454	superfamily	260271

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_50177	PHATRDRAFT_50177	149475	250373	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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