263640 PRK05031
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263640 chr_10 PRK05031 317529 319100 - PRK05031

Synonyms

NCBI ID Ensembl Genomes exon ID
7447041 Thaps263640.2, Thaps263640.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0291

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0114
 0.48

Most Highly Correlated Transcripts

24835

hypothetical protein
0.8525

42740

deoxycytidylate_deaminase
0.8509

15950

Peptidase_A22B superfamily
0.8489

20637

SNc
0.8388

23795

SGT1 superfamily
0.8349

bd935

(bd935) TFIIS_I
0.8302

22162

hypothetical protein
0.8298

262555

AAT_I superfamily
0.8292

31412

NAD_bind_amino_acid_DH superfamily
0.8243

26031

SHMT
0.8239

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PRK05031 tRNA (uracil-5-)-methyltransferase; Validated - 116.467 4.21E-29 107 - 504 multi-dom 235332

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42959 PHATRDRAFT_42959 218078 5134 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008757 -

GO:0008757

S-adenosylmethionine-dependent methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a substrate.
GO Category: 
MF

Add comment

Log in to post comments