263848 Voltage_gated_ClC superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263848 chr_11b Voltage_gated_ClC superfamily 68800 71844 + Voltage_gated_ClC superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0213

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0245
 0.28

Most Highly Correlated Transcripts

263653

P-ATPase-V
0.8877

264773

ABCG_PDR_domain2
0.8584

261357

NAD_binding_8 superfamily
0.858

25248

MATE_like superfamily
0.8561

6592

TroA-like superfamily
0.8527

1554

Glyco_hydro_81 superfamily
0.8525

4445

hypothetical protein
0.8515

37662

ATPase-IIA1_Ca
0.8514

261582

PKCI_related
0.8486

28410

PldB
0.8444

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CBS_pair_EriC_assoc_euk_bac This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the... cl15354 75.7517 2.41E-16 612 - 682 specific 239964
CBS_pair superfamily The CBS domain, named after human CBS, is a small domain originally identified in cystathionine... - 75.7517 2.41E-16 612 - 682 superfamily 265675
Voltage_gated_ClC superfamily CLC voltage-gated chloride channel. The ClC chloride channels catalyse the selective flow of Cl-... - 431.306 7.77E-144 1 - 505 superfamily 261508

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_52412 PHATRDRAFT_52412 203497 209632 459148 Cre01.g038700.t1.2 AT5G49890.1 520430

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005247 GO:0006821 GO:0016020 -

GO:0005247

voltage-gated chloride channel activity

Details: 
Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.
GO Category: 
MF

GO:0006821

chloride transport

Details: 
The directed movement of chloride into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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