264361 pepN
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264361 chr_16a pepN 193383 196479 - pepN

Synonyms

NCBI ID Ensembl Genomes exon ID
7449984 Thaps264361.1, Thaps264361.2, Thaps264361.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0006

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0244
 0.36

Most Highly Correlated Transcripts

2045

hypothetical protein
0.8886

1650

hypothetical protein
0.8859

37596

SpoT
0.8703

bd1757

(bd1757) NA
0.8635

21620

AAT_I superfamily
0.8627

20920

S2P-M50_like_2
0.8611

264773

ABCG_PDR_domain2
0.8558

5807

hypothetical protein
0.8518

33685

(MCM1) PRK09426
0.8515

4571

P4Hc
0.8512

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
M1_APN_1 Peptidase M1 family containing Aminopeptidase N; This family contains aminopeptidase N (APN; CD13;... cl14813 1250.62 0 118 - 994 specific 189007
GluZincin superfamily Peptidase Gluzincin family (thermolysin-like proteinases, TLPs) includes peptidases M1, M2, M3, M4... - 1250.62 0 118 - 994 superfamily 265459
pepN aminopeptidase N; Provisional - 1345.17 0 109 - 994 multi-dom 237585

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 433917 Not available AT1G63770.4 494746

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0004179 GO:0006508 GO:0008237 GO:0008270 -

GO:0004179

NA

Details: 
NA
GO Category: 
NA

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008237

metallopeptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

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