269076 Peptidase_C19 superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
269076 chr_6 Peptidase_C19 superfamily 870350 873114 + Peptidase_C19 superfamily
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0257
AAA
0.9143
Sin_N superfamily
0.8571
(Tp_CCCH2) WD40 superfamily
0.8512
EEP superfamily
0.8478
HA2
0.8408
hypothetical protein
0.8406
SGT1 superfamily
0.8405
Sec1
0.8366
hypothetical protein
0.8357
hypothetical protein
0.8345
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_C19 superfamily Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove... - 230.287 1.20E-68 252 - 761 superfamily 261337
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_18008 PHATRDRAFT_18008 211853 31088 426257 Cre02.g080350.t1.1 AT3G20630.1 349574
KEGG description KEGG Pathway
Not available Not available
GO:0004197 GO:0004221 GO:0006511 -

cysteine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

ubiquitin thiolesterase activity

Details: 
Catalysis of the reaction: ubiquitin C-terminal thioester + H2O = ubiquitin + a thiol.
GO Category: 
MF

ubiquitin-dependent protein catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO Category: 
BP
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