269744 (APG2) Adaptin_N
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269744 chr_14 (APG2) Adaptin_N 289410 292745 + Adaptin_N

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0443

Most Highly Correlated Transcripts

12899

AAA
0.8876

7365

Cupin_8 superfamily
0.8682

41687

(APB1) Adaptin_N
0.8618

1499

(CTS1) PTZ00399
0.8592

42508

WD40
0.8579

16114

PLN02350
0.845

264556

FBPase
0.8424

39615

(COP5) AP_delta-COPI_MHD
0.8419

21201

hypothetical protein
0.8354

23500

crypto_DASH
0.8334

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Alpha_adaptinC2 Adaptin C-terminal domain; Alpha adaptin is a heterotetramer which regulates clathrin-bud formation... cl03759 79.7021 2.33E-17 750 - 867 specific 251591
Alpha_adaptinC2 superfamily Adaptin C-terminal domain; Alpha adaptin is a heterotetramer which regulates clathrin-bud formation... - 79.7021 2.33E-17 750 - 867 superfamily 261874
Adaptin_N Adaptin N terminal region; This family consists of the N terminal region of various alpha, beta and... - 355.762 4.58E-112 22 - 587 multi-dom 250737

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_13511 PHATR_13511 225310 208475 416541 Cre16.g676650.t1.2 AT1G60070.1 478083

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006461 GO:0006886 GO:0030130 -

GO:0006461

protein complex assembly

Details: 
The aggregation, arrangement and bonding together of a set of components to form a protein complex.
GO Category: 
BP

GO:0006886

intracellular protein transport

Details: 
The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO Category: 
BP

GO:0030130

clathrin coat of trans-Golgi network vesicle

Details: 
A clathrin coat found on a vesicle of the trans-Golgi network.
GO Category: 
CC

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