28682 TCP1_theta
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
28682 chr_6 TCP1_theta 1234843 1236691 + TCP1_theta

Synonyms

NCBI ID Ensembl Genomes exon ID
7442400 Thaps28682.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0290

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0279
 0.39

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9573

268443

SAICAR_synt_Sc
0.9126

36007

Aldolase_II superfamily
0.9082

25279

TCP1_zeta
0.8986

37410

TCP1_alpha
0.8924

13393

PLN02321
0.8923

40200

TRX_reduct
0.8887

23102

TCP1_epsilon
0.8869

bd974

(bd974) DUF751
0.8846

267979

HCO3_cotransp superfamily
0.8808

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TCP1_theta TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit. Chaperonins are involved in... cl02777 640.037 0 21 - 538 specific 239457
chaperonin_like superfamily chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share... - 640.037 0 21 - 538 superfamily 261443

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_40956 PHATRDRAFT_40956 175456 193127 109999 Cre03.g168450.t1.2 AT3G03960.1 553521

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005515 GO:0005524 GO:0044267 GO:0003763 -

GO:0005515

protein binding

Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0044267

cellular protein metabolic process

Details: 
The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes cellular protein modification.
GO Category: 
BP

GO:0003763

NA

Details: 
NA
GO Category: 
NA

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