31007 DsbA_FrnEThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
31007	chr_1	DsbA_FrnE	2807142	2807753	+	DsbA_FrnE

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445105	Thaps31007.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0242

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0003	0.47	11000 2

Most Highly Correlated Transcripts

268443 SAICAR_synt_Sc 0.9033	7794 UPF0054 0.8859	3959 KPHMT-like 0.8752	33203 AAT_I superfamily 0.8646	36007 Aldolase_II superfamily 0.8642	19158 GRX_PICOT_like 0.8576
39946 (AMS2) PTZ00104 0.856	268574 Tim17 0.8555	24619 2-Hacid_dh_1 0.8549	35136 NA 0.8521

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DsbA_FrnE		DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif. It is presumed to...	cl00388	172.765	8.38E-54	1 - 196	specific	239322
Thioredoxin_like superfamily		Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX...	-	172.765	8.38E-54	1 - 196	superfamily	260398

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_31619	PHATRDRAFT_31619	181609	Not available	Not available	Cre12.g553700.t1.2	AT5G38900.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0015035 GO:0030288 -

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