36081 Chloroa_b-bindThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
36081	chr_8	Chloroa_b-bind	833567	833959	-	Chloroa_b-bind

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Thaps36081.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0022

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0223	0.11	0.0000034 0.000084

Most Highly Correlated Transcripts

bd218 (bd218) Chloroa_b-bind superfamily 0.9954	3816 (Lhcr7) fucoxanthin chl a/c light-harvesting protein 0.9928	4883 (Lhcr14) fucoxanthin chlorophyll a/c light-harvesting protein, lhcr type 0.9877	bd1820 (bd1820) Fasciclin 0.9865	bd1160 (bd1160) Chloroa_b-bind superfamily 0.9853	33131 Chloroa_b-bind 0.9852
270222 0.9839	34276 Chloroa_b-bind 0.9814	38122 Chloroa_b-bind superfamily 0.9791	40747 Chloroa_b-bind 0.9726

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Chloroa_b-bind		Chlorophyll A-B binding protein; Chlorophyll A-B binding protein.	cl02879	70.4134	2.16E-16	7 - 126	specific	249913
Chloroa_b-bind superfamily		Chlorophyll A-B binding protein; Chlorophyll A-B binding protein.	-	70.4134	2.16E-16	7 - 126	superfamily	261492

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
33161		Not available	267995	244079	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0009765 GO:0016020 -

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