42965 GlcD
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
42965 chr_20 GlcD 465557 467287 - GlcD

Synonyms

NCBI ID Ensembl Genomes exon ID
7448547 Thaps42965.2, Thaps42965.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0368

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0020
 0.47

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9288

11180

hypothetical protein
0.8321

6838

DUF3754
0.831

bd686

(bd686) Glyco_transf_22 superfamily
0.8279

22142

hypothetical protein
0.8276

22520

RecN
0.8245

7140

Ifi-6-16
0.8233

264556

FBPase
0.8187

5185

RPN7 superfamily
0.8185

16613

S_TKc
0.8163

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
FAD-oxidase_C superfamily FAD linked oxidases, C-terminal domain; This domain has a ferredoxin-like fold. - 142.141 1.01E-38 255 - 525 superfamily 251615
FAD-oxidase_C superfamily FAD linked oxidases, C-terminal domain; This domain has a ferredoxin-like fold. - 142.141 1.01E-38 255 - 525 superfamily 251615
FAD_binding_4 FAD binding domain; This family consists of various enzymes that use FAD as a co-factor, most of... cl19922 120.782 2.07E-32 81 - 216 specific 250709
FAD_binding_4 superfamily FAD binding domain; This family consists of various enzymes that use FAD as a co-factor, most of... - 120.782 2.07E-32 81 - 216 superfamily 268275
GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion] - 316.451 1.00E-101 58 - 528 multi-dom 223354

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_20192 PHATRDRAFT_20192 207550 263030 Not available Cre08.g370550.t1.1 AT4G36400.2 310261

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006118 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

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