5321 CobN-Mg_chel superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5321 chr_5 CobN-Mg_chel superfamily 901656 904137 - CobN-Mg_chel superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps5321.2, Thaps5321.3, Thaps5321.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0387

Most Highly Correlated Transcripts

8244

Lipase superfamily
0.952

34228

Strumpellin superfamily
0.9475

4959

hypothetical protein
0.9425

12602

MYSc
0.9413

4338

hypothetical protein
0.9386

268454

CAP_ED
0.938

2065

hypothetical protein
0.9337

38230

MYSc
0.9326

262607

WD40 superfamily
0.9322

11869

hypothetical protein
0.9314

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CobN-Mg_chel superfamily CobN/Magnesium Chelatase; This family contains a domain common to the cobN protein and to magnesium... - 289.094 5.69E-84 239 - 723 superfamily 251343
DUF3479 superfamily Domain of unknown function (DUF3479); This presumed domain is functionally uncharacterized. This... - 145.786 2.93E-40 77 - 236 superfamily 256763
DUF3479 superfamily Domain of unknown function (DUF3479); This presumed domain is functionally uncharacterized. This... - 145.786 2.93E-40 77 - 236 superfamily 256763

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_10100 PHATRDRAFT_10100 169081 258576 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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