Module 199 Residual: 0.54

Title Bicluster Model Residual Score
bicluster_0199 v02 0.54 -20.05
Displaying 1 - 17 of 17
Rv0272c

Details for Rv0272c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.64 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0272c

Tuberculist Genomic Region

Rv0273c Transcriptional regulator, TetR family

Details for Rv0273c - Transcriptional regulator, TetR family

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.66 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0273c

Tuberculist Genomic Region

Rv0274 Glyoxalase family protein

Details for Rv0274 - Glyoxalase family protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.68 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0274

Tuberculist Genomic Region

Rv0476

Details for Rv0476 -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.83 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0476

Tuberculist Genomic Region

Rv0477 POSSIBLE CONSERVED SECRETED PROTEIN

Details for Rv0477 - POSSIBLE CONSERVED SECRETED PROTEIN

GO Terms: GO:0005576

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.78 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0477

Tuberculist Genomic Region

Rv1635c Possible membrane protein

Details for Rv1635c - Possible membrane protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.98 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1635c

Tuberculist Genomic Region

Rv3201c ATP-dependent DNA helicase SCO5184

Details for Rv3201c - ATP-dependent DNA helicase SCO5184

GO Terms: GO:0005576, GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.32 | In vitro Essential: 0.18 | In vivo Essential: NA

Go to Gene Page: Rv3201c

Tuberculist Genomic Region

Rv3526 Terminal oxygenase KshA

Details for Rv3526 - Terminal oxygenase KshA

GO Terms: GO:0070723

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.75 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3526

Tuberculist Genomic Region

Rv3534c 4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)

Details for Rv3534c - 4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)

GO Terms: NA

PATRIC Pathways: Biphenyl degradation, Toluene and xylene degradation, Phenylalanine metabolism, Benzoate degradation via hydroxylation

Essentiality: Griffin Essential: 0.92 | In vitro Essential: NA | In vivo Essential: 0.39

Go to Gene Page: Rv3534c

Tuberculist Genomic Region

Rv3535c Acetaldehyde dehydrogenase, acetylating, (EC 1.2.1.10) in gene cluster for degradation of phenols, cresols, catechol

Details for Rv3535c - Acetaldehyde dehydrogenase, acetylating, (EC 1.2.1.10) in gene cluster for degradation of phenols, cresols, catechol

GO Terms: NA

PATRIC Pathways: Toluene and xylene degradation, Butanoate metabolism, Biphenyl degradation, Benzoate degradation via hydroxylation, Pyruvate metabolism

Essentiality: Griffin Essential: 0.95 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3535c

Tuberculist Genomic Region

Rv3536c 2-keto-4-pentenoate hydratase (EC 4.2.1.-)

Details for Rv3536c - 2-keto-4-pentenoate hydratase (EC 4.2.1.-)

GO Terms: GO:0003824, GO:0008152, GO:0016829, GO:0006725

PATRIC Pathways: Toluene and xylene degradation, Benzoate degradation via hydroxylation, Phenylalanine metabolism, Biphenyl degradation

Essentiality: Griffin Essential: 0.90 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3536c

Tuberculist Genomic Region

Rv3537 3-oxosteroid 1-dehydrogenase (EC 1.3.99.4)

Details for Rv3537 - 3-oxosteroid 1-dehydrogenase (EC 1.3.99.4)

GO Terms: GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.07 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3537

Tuberculist Genomic Region

Rv3538 Enoyl-CoA hydratase

Details for Rv3538 - Enoyl-CoA hydratase

GO Terms: GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.34 | In vitro Essential: 0.14 | In vivo Essential: NA

Go to Gene Page: Rv3538

Tuberculist Genomic Region

Rv3568c 2,3-dihydroxybiphenyl 1,2-dioxygenase

Details for Rv3568c - 2,3-dihydroxybiphenyl 1,2-dioxygenase

GO Terms: GO:0016702, GO:0070723

PATRIC Pathways: Biphenyl degradation, gamma-Hexachlorocyclohexane degradation

Essentiality: Griffin Essential: 0.64 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3568c

Tuberculist Genomic Region

Rv3569c 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)

Details for Rv3569c - 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)

GO Terms: GO:0005618, GO:0005886, GO:0034820, GO:0042803, GO:0044117

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.97 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3569c

Tuberculist Genomic Region

Rv3574 Transcriptional regulator kstR (Rv3574), TetR family

Details for Rv3574 - Transcriptional regulator kstR (Rv3574), TetR family

GO Terms: GO:0003677, GO:0042803

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.83 | In vitro Essential: NA | In vivo Essential: 0.09

Go to Gene Page: Rv3574

Tuberculist Genomic Region

Rv3572

Details for Rv3572 -

GO Terms: GO:0005576

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.90 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3572

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 0.000000000000001 e-value: 0.000000085
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
No enrichment
Displaying 1 - 15 of 15
GO:0005576 |

extracellular region

GO:0005886 |

plasma membrane

GO:0040007 |

growth

GO:0070723 |

response to cholesterol

GO:0003824 |

catalytic activity

GO:0008152 |

metabolic process

GO:0016829 |

lyase activity

GO:0006725 |

cellular aromatic compound metabolic process

GO:0016702 |

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

GO:0005618 |

cell wall

GO:0034820 |

4,9-DSHA hydrolase activity

GO:0042803 |

protein homodimerization activity

GO:0044117 |

growth of symbiont in host

GO:0003677 |

DNA binding