Organism : Pseudomonas aeruginosa | Module List :
Regulation information for PA1763(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for PA1763
|Gene||Common Name||Description||Module membership|
|PA0021||PA0021||hypothetical protein (NCBI)||16, 483|
|PA0144||PA0144||hypothetical protein (NCBI)||291, 443|
|PA0289||gpuR||transcriptional activator GpuR (NCBI)||443, 469|
|PA0339||PA0339||hypothetical protein (NCBI)||30, 483|
|PA0458||PA0458||probable major facilitator superfamily (MFS) transporter (NCBI)||3, 443|
|PA0475||PA0475||probable transcriptional regulator (NCBI)||171, 443|
|PA0575||PA0575||hypothetical protein (NCBI)||196, 483|
|PA0657||PA0657||probable ATPase (NCBI)||443, 523|
|PA0704||PA0704||amidase (NCBI)||388, 443|
|PA0808||PA0808||hypothetical protein (NCBI)||163, 443|
|PA0811||PA0811||probable major facilitator superfamily (MFS) transporter (NCBI)||33, 483|
|PA0813||PA0813||hypothetical protein (NCBI)||243, 443|
|PA0815||PA0815||probable transcriptional regulator (NCBI)||243, 443|
|PA0850||PA0850||hypothetical protein (NCBI)||483, 489|
|PA1038||PA1038||hypothetical protein (NCBI)||338, 483|
|PA1063||PA1063||hypothetical protein (NCBI)||203, 443|
|PA1521||PA1521||probable guanine deaminase (NCBI)||163, 443|
|PA1578||PA1578||hypothetical protein (NCBI)||68, 483|
|PA1680||PA1680||hypothetical protein (NCBI)||206, 443|
|PA1736||PA1736||acetyl-CoA acetyltransferase (NCBI)||294, 483|
|PA1762||PA1762||hypothetical protein (NCBI)||443, 489|
|PA1763||PA1763||hypothetical protein (NCBI)||443, 483|
|PA1765||PA1765||hypothetical protein (NCBI)||153, 443|
|PA1886||polB||DNA polymerase II (NCBI)||321, 483|
|PA1973||pqqF||pyrroloquinoline quinone biosynthesis protein F (NCBI)||253, 483|
|PA2059||PA2059||probable permease of ABC transporter (NCBI)||132, 483|
|PA2121||PA2121||probable transcriptional regulator (NCBI)||252, 443|
|PA2123||PA2123||probable transcriptional regulator (NCBI)||443, 483|
|PA2701||PA2701||probable major facilitator superfamily (MFS) transporter (NCBI)||345, 483|
|PA3180||PA3180||hypothetical protein (NCBI)||53, 483|
|PA3241||PA3241||hypothetical protein (NCBI)||253, 483|
|PA3272||PA3272||probable ATP-dependent DNA helicase (NCBI)||328, 483|
|PA3277||PA3277||short chain dehydrogenase (NCBI)||452, 483|
|PA3343||PA3343||hypothetical protein (NCBI)||203, 443|
|PA3424||PA3424||hypothetical protein (NCBI)||355, 483|
|PA3425||PA3425||hypothetical protein (NCBI)||443, 483|
|PA3426||PA3426||enoyl-CoA hydratase (NCBI)||28, 443|
|PA3534||PA3534||probable oxidoreductase (NCBI)||483, 489|
|PA3715||PA3715||hypothetical protein (NCBI)||101, 443|
|PA3847||PA3847||hypothetical protein (NCBI)||397, 443|
|PA3856||PA3856||hypothetical protein (NCBI)||378, 443|
|PA3943||PA3943||hypothetical protein (NCBI)||443, 546|
|PA3944||PA3944||hypothetical protein (NCBI)||378, 443|
|PA4091||hpaA||4-hydroxyphenylacetate 3-monooxygenase large chain (NCBI)||171, 483|
|PA4147||acoR||transcriptional regulator AcoR (NCBI)||236, 443|
|PA4199||PA4199||probable acyl-CoA dehydrogenase (NCBI)||3, 443|
|PA4201||ddlA||D-alanine-D-alanine ligase A (NCBI)||443, 469|
|PA4282||PA4282||probable exonuclease (NCBI)||443, 523|
|PA4283||recD||exodeoxyribonuclease V alpha chain (NCBI)||49, 483|
|PA4330||PA4330||probable enoyl-CoA hydratase/isomerase (NCBI)||192, 443|
|PA4331||PA4331||hypothetical protein (NCBI)||62, 443|
|PA4332||PA4332||hypothetical protein (NCBI)||62, 443|
|PA4335||PA4335||hypothetical protein (NCBI)||443, 462|
|PA4337||PA4337||hypothetical protein (NCBI)||246, 483|
|PA4346||PA4346||hypothetical protein (NCBI)||171, 483|
|PA4397||panE||2-dehydropantoate 2-reductase (NCBI)||10, 443|
|PA4435||PA4435||probable acyl-CoA dehydrogenase (NCBI)||292, 483|
|PA4603||PA4603||hypothetical protein (NCBI)||246, 483|
|PA4791||PA4791||hypothetical protein (NCBI)||53, 483|
|PA4875||PA4875||hypothetical protein (NCBI)||397, 443|
|PA5115||PA5115||hypothetical protein (NCBI)||469, 483|
|PA5272||cyaA||adenylate cyclase (NCBI)||127, 443|
|PA5297||poxB||pyruvate dehydrogenase (cytochrome) (NCBI)||28, 483|
|PA5542||PA5542||hypothetical protein (NCBI)||483, 491|
|PA5544||PA5544||hypothetical protein (NCBI)||246, 483|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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If the gene is a member of a module, regulators influencing that module are also considered to regulate the gene. Regulators table list total number of regulatory influences, regulators, modules and type of the influence.
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Identity of gene members in a module may help to identify potential interactions between different functional modules. Therefore, neighbor genes that share the same module(s) with gene under consideration are shown here. For each memebr, gene name, description and modules that contain it are listed.
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- 1. All genomic elements for the organism are represented as a circle and each element is separated by black tick marks. In this example chromosome and pDV represent main chromosome and plasmid for D. vulgaris Hildenborough, respectively.
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