Organism : Pseudomonas aeruginosa | Module List :
Regulation information for PA3715(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for PA3715
|Gene||Common Name||Description||Module membership|
|PA0144||PA0144||hypothetical protein (NCBI)||291, 443|
|PA0289||gpuR||transcriptional activator GpuR (NCBI)||443, 469|
|PA0458||PA0458||probable major facilitator superfamily (MFS) transporter (NCBI)||3, 443|
|PA0475||PA0475||probable transcriptional regulator (NCBI)||171, 443|
|PA0486||PA0486||hypothetical protein (NCBI)||23, 101|
|PA0657||PA0657||probable ATPase (NCBI)||443, 523|
|PA0704||PA0704||amidase (NCBI)||388, 443|
|PA0708||PA0708||probable transcriptional regulator (NCBI)||101, 138|
|PA0808||PA0808||hypothetical protein (NCBI)||163, 443|
|PA0813||PA0813||hypothetical protein (NCBI)||243, 443|
|PA0815||PA0815||probable transcriptional regulator (NCBI)||243, 443|
|PA0874||PA0874||hypothetical protein (NCBI)||58, 101|
|PA0984||PA0984||colicin immunity protein (NCBI)||101, 231|
|PA1044||PA1044||hypothetical protein (NCBI)||101, 375|
|PA1063||PA1063||hypothetical protein (NCBI)||203, 443|
|PA1110||PA1110||hypothetical protein (NCBI)||101, 375|
|PA1163||PA1163||probable glucosyl transferase (NCBI)||101, 326|
|PA1227||PA1227||hypothetical protein (NCBI)||101, 438|
|PA1367||PA1367||hypothetical protein (NCBI)||101, 335|
|PA1383||PA1383||hypothetical protein (NCBI)||101, 254|
|PA1521||PA1521||probable guanine deaminase (NCBI)||163, 443|
|PA1570||PA1570||probable transcriptional regulator (NCBI)||101, 157|
|PA1680||PA1680||hypothetical protein (NCBI)||206, 443|
|PA1690||pscU||translocation protein in type III secretion (NCBI)||101, 218|
|PA1691||pscT||translocation protein in type III secretion (NCBI)||101, 218|
|PA1702||PA1702||conserved hypothetical protein in type III secretion (NCBI)||101, 218|
|PA1704||pcrR||transcriptional regulator protein PcrR (NCBI)||101, 218|
|PA1762||PA1762||hypothetical protein (NCBI)||443, 489|
|PA1763||PA1763||hypothetical protein (NCBI)||443, 483|
|PA1765||PA1765||hypothetical protein (NCBI)||153, 443|
|PA2121||PA2121||probable transcriptional regulator (NCBI)||252, 443|
|PA2123||PA2123||probable transcriptional regulator (NCBI)||443, 483|
|PA2692||PA2692||probable transcriptional regulator (NCBI)||101, 126|
|PA2852||PA2852||hypothetical protein (NCBI)||101, 335|
|PA2929||PA2929||hypothetical protein (NCBI)||23, 101|
|PA3343||PA3343||hypothetical protein (NCBI)||203, 443|
|PA3425||PA3425||hypothetical protein (NCBI)||443, 483|
|PA3426||PA3426||enoyl-CoA hydratase (NCBI)||28, 443|
|PA3715||PA3715||hypothetical protein (NCBI)||101, 443|
|PA3847||PA3847||hypothetical protein (NCBI)||397, 443|
|PA3856||PA3856||hypothetical protein (NCBI)||378, 443|
|PA3869||PA3869||hypothetical protein (NCBI)||101, 326|
|PA3943||PA3943||hypothetical protein (NCBI)||443, 546|
|PA3944||PA3944||hypothetical protein (NCBI)||378, 443|
|PA4147||acoR||transcriptional regulator AcoR (NCBI)||236, 443|
|PA4199||PA4199||probable acyl-CoA dehydrogenase (NCBI)||3, 443|
|PA4201||ddlA||D-alanine-D-alanine ligase A (NCBI)||443, 469|
|PA4282||PA4282||probable exonuclease (NCBI)||443, 523|
|PA4330||PA4330||probable enoyl-CoA hydratase/isomerase (NCBI)||192, 443|
|PA4331||PA4331||hypothetical protein (NCBI)||62, 443|
|PA4332||PA4332||hypothetical protein (NCBI)||62, 443|
|PA4335||PA4335||hypothetical protein (NCBI)||443, 462|
|PA4355||PA4355||probable major facilitator superfamily (MFS) transporter (NCBI)||101, 108|
|PA4397||panE||2-dehydropantoate 2-reductase (NCBI)||10, 443|
|PA4508||PA4508||probable transcriptional regulator (NCBI)||44, 101|
|PA4783||PA4783||hypothetical protein (NCBI)||101, 229|
|PA4830||PA4830||hypothetical protein (NCBI)||28, 101|
|PA4831||PA4831||probable transcriptional regulator (NCBI)||28, 101|
|PA4875||PA4875||hypothetical protein (NCBI)||397, 443|
|PA5030||PA5030||probable major facilitator superfamily (MFS) transporter (NCBI)||101, 196|
|PA5272||cyaA||adenylate cyclase (NCBI)||127, 443|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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