Organism : Clostridium acetobutylicum | Module List :
Regulation information for CAC0041(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Functional Enrichment for CAC0041
Module neighborhood information for CAC0041
|Gene||Common Name||Description||Module membership|
|CAC0037||CAC0037||MinD family ATPase from ParA/SOJ subfamily (NCBI ptt file)||264, 353|
|CAC0041||CAC0041||Uncharacterized small conserved protein, homolog of yfjA/yukE B.subtilis (NCBI ptt file)||208, 264|
|CAC0044||CAC0044||Predicted membrane protein (NCBI ptt file)||264, 312|
|CAC0045||CAC0045||TPR-repeat-containing protein (NCBI ptt file)||102, 264|
|CAC0046||CAC0046||Hypothetical protein, CF-2 family (NCBI ptt file)||264, 366|
|CAC0048||CAC0048||Hypothetical protein, CF-17 family (NCBI ptt file)||264, 333|
|CAC0049||CAC0049||Hypothetical protein, CF-17 family (NCBI ptt file)||242, 264|
|CAC0073||CAC0073||Uncharacterized protein, ortholog of YYBG B.subtilis (NCBI ptt file)||264, 324|
|CAC0227||CAC0227||Predicted permease (NCBI ptt file)||169, 208|
|CAC0399||CAC0399||Hypothetical protein, CF-24 family (NCBI ptt file)||258, 264|
|CAC0404||CAC0404||Serine/threonine protein kinase fused to TPR repeats domain (NCBI ptt file)||242, 264|
|CAC0405||CAC0405||Hypothetical protein (NCBI ptt file)||242, 264|
|CAC0406||CAC0406||Predicted membrane protein, containing FHA domain (NCBI ptt file)||242, 264|
|CAC0410||CAC0410||Uncharacterized small conserved protein, homolog of YUKE/YFJA (NCBI ptt file)||258, 264|
|CAC0411||CAC0411||Uncharacterized small conserved protein, homolog of YUKE/YFJA (NCBI ptt file)||242, 264|
|CAC0412||CAC0412||TPR-repeat-containing protein (NCBI ptt file)||242, 264|
|CAC0540||CAC0540||Beta-mannanase ManB-like enzyme, contains ChW-repeats (NCBI ptt file)||264, 324|
|CAC1094||CAC1094||Cation efflux system protein (NCBI ptt file)||208, 320|
|CAC1247||pbpA||Penicillin-binding protein 2 (NCBI ptt file)||144, 208|
|CAC1387||CAC1387||Membrane associated chemotaxis sensory transducer protein (MSP domain and HAMP domain) (NCBI ptt file)||100, 208|
|CAC1513||asrA||Anaerobic sulfite reductase (Fe-S subunit) (NCBI ptt file)||208, 240|
|CAC1521||CAC1521||Uncharacterized membrane protein, yetF/ydfS/ykjA/yrbG/ydfR B.subtilis ortholog (NCBI ptt file)||150, 208|
|CAC1702||CAC1702||Hypothetical protein (NCBI ptt file)||208, 336|
|CAC1959||CAC1959||Uncharacterized protein, YYAC B.subtilis homolog (fragment) (NCBI ptt file)||190, 208|
|CAC1960||CAC1960||Uncharacterized protein, YYAC B.subtilis homolog (NCBI ptt file)||208, 336|
|CAC1974||CAC1974||Hypothetical secreted protein (NCBI ptt file)||208, 336|
|CAC1981||CAC1981||Hypothetical protein (NCBI ptt file)||208, 336|
|CAC2028||CAC2028||Hypothetical protein, CF-4 family (NCBI ptt file)||205, 208|
|CAC2046||CAC2046||Predicted membrane protein (NCBI ptt file)||208, 336|
|CAC2048||CAC2048||Uncharacterized secreted protein (NCBI ptt file)||208, 336|
|CAC2049||CAC2049||Predicted membrane protein (NCBI ptt file)||208, 336|
|CAC2454||CAC2454||Hypothetical protein, CF-13 family (NCBI ptt file)||190, 264|
|CAC2456||CAC2456||Hypothetical protein, CF-40 family (NCBI ptt file)||242, 264|
|CAC2457||CAC2457||Hypothetical protein (NCBI ptt file)||242, 264|
|CAC2461||CAC2461||Hypothetical protein, CF-13 family (NCBI ptt file)||264, 273|
|CAC2462||CAC2462||Hypothetical protein, CF-13 family (NCBI ptt file)||264, 273|
|CAC2493||CAC2493||Phospholipase C family protein (NCBI ptt file)||205, 208|
|CAC2503||CAC2503||Hypothetical protein (NCBI ptt file)||65, 208|
|CAC2745||CAC2745||Membrane associated methyl-accepting chemotaxis protein (NCBI ptt file)||208, 236|
|CAC2921||thiH||Thiamine biosynthesis enzyme, thiH (NCBI ptt file)||208, 363|
|CAC2923||CAC2923||Dinucleotide-utilizing enzyme involved in molybdopterin/thiamine biosynthesis (NCBI ptt file)||208, 363|
|CAC2924||thiS||Uncharacterized protein, possibly involved in thiamine biosynthesis (NCBI ptt file)||208, 336|
|CAC3234||CAC3234||Uncharacterized conserved protein, YVBJ B.subtilis ortholog with N-terminal C4-type Zn-finger domain (NCBI ptt file)||264, 338|
|CAC3235||CAC3235||Uncharacterized conserved protein, YVBJ B.subtilis homolog (NCBI ptt file)||264, 338|
|CAC3259||CAC3259||Predicted membrane protein; CF_1 family (NCBI ptt file)||264, 338|
|CAC3415||CAC3415||ABC-type multidrug/protein/lipid transport system, ATPase component (NCBI ptt file)||123, 208|
|CAC3476||CAC3476||Methyl-accepting chemotaxis protein (NCBI ptt file)||208, 353|
|CAC3488||CAC3488||Predicted transcriptional regulator (NCBI ptt file)||69, 208|
|CAC3554||CAC3554||Siderophore/Surfactin synthetase related protein (NCBI ptt file)||26, 208|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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