Organism : Clostridium acetobutylicum | Module List :
Cation efflux system protein (NCBI ptt file)
Functional Annotations (5)
|Predicted Co/Zn/Cd cation transporters||cog/ cog|
|cation transport||go/ biological_process|
|cation transmembrane transporter activity||go/ molecular_function|
Regulation information for CAC1094(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Functional Enrichment for CAC1094
Module neighborhood information for CAC1094
|Gene||Common Name||Description||Module membership|
|CAC0041||CAC0041||Uncharacterized small conserved protein, homolog of yfjA/yukE B.subtilis (NCBI ptt file)||208, 264|
|CAC0181||CAC0181||Similar to beta-lactamase (NCBI ptt file)||314, 320|
|CAC0182||CAC0182||Beta-glucosidase homolog (NCBI ptt file)||236, 320|
|CAC0214||CAC0214||Endoglucanase, aminopeptidase M42 family (NCBI ptt file)||22, 320|
|CAC0227||CAC0227||Predicted permease (NCBI ptt file)||169, 208|
|CAC0253||nifH||Nitrogenase iron protein (nitrogenase component II) gene nifH (NCBI ptt file)||98, 320|
|CAC0436||CAC0436||Predicted xylanase/chitin deacetilase, similar to yxkH B.subtilis (NCBI ptt file)||320, 353|
|CAC0794||CAC0794||Nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase) (NCBI ptt file)||98, 320|
|CAC0832||CAC0832||Fusion: transcriptional regulator and conserved domain (NCBI ptt file)||38, 320|
|CAC1094||CAC1094||Cation efflux system protein (NCBI ptt file)||208, 320|
|CAC1247||pbpA||Penicillin-binding protein 2 (NCBI ptt file)||144, 208|
|CAC1387||CAC1387||Membrane associated chemotaxis sensory transducer protein (MSP domain and HAMP domain) (NCBI ptt file)||100, 208|
|CAC1462||CAC1462||Levanase/invertase (NCBI ptt file)||98, 320|
|CAC1512||nirC||Formate/nitrite family of transporter (NCBI ptt file)||240, 320|
|CAC1513||asrA||Anaerobic sulfite reductase (Fe-S subunit) (NCBI ptt file)||208, 240|
|CAC1521||CAC1521||Uncharacterized membrane protein, yetF/ydfS/ykjA/yrbG/ydfR B.subtilis ortholog (NCBI ptt file)||150, 208|
|CAC1550||CAC1550||Methionine sulfoxide reductase C-terminal domain related protein, YPPQ ortholog (NCBI ptt file)||179, 320|
|CAC1647||CAC1647||Hypothetical protein (NCBI ptt file)||244, 320|
|CAC1702||CAC1702||Hypothetical protein (NCBI ptt file)||208, 336|
|CAC1959||CAC1959||Uncharacterized protein, YYAC B.subtilis homolog (fragment) (NCBI ptt file)||190, 208|
|CAC1960||CAC1960||Uncharacterized protein, YYAC B.subtilis homolog (NCBI ptt file)||208, 336|
|CAC1974||CAC1974||Hypothetical secreted protein (NCBI ptt file)||208, 336|
|CAC1981||CAC1981||Hypothetical protein (NCBI ptt file)||208, 336|
|CAC2028||CAC2028||Hypothetical protein, CF-4 family (NCBI ptt file)||205, 208|
|CAC2046||CAC2046||Predicted membrane protein (NCBI ptt file)||208, 336|
|CAC2048||CAC2048||Uncharacterized secreted protein (NCBI ptt file)||208, 336|
|CAC2049||CAC2049||Predicted membrane protein (NCBI ptt file)||208, 336|
|CAC2099||CAC2099||Hypothetical protein (NCBI ptt file)||270, 320|
|CAC2103||CAC2103||General secretion pathway protein, pilin family (NCBI ptt file)||54, 320|
|CAC2105||CAC2105||General secretion pathway protein E, ATPase (NCBI ptt file)||256, 320|
|CAC2493||CAC2493||Phospholipase C family protein (NCBI ptt file)||205, 208|
|CAC2503||CAC2503||Hypothetical protein (NCBI ptt file)||65, 208|
|CAC2511||CAC2511||Predicted membrane protein (NCBI ptt file)||272, 320|
|CAC2516||CAC2516||Hypothetical protein (NCBI ptt file)||89, 320|
|CAC2569||CAC2569||NimC/NimA family protein (NCBI ptt file)||279, 320|
|CAC2609||CAC2609||Cytidine deaminase family enzyme (NCBI ptt file)||270, 320|
|CAC2745||CAC2745||Membrane associated methyl-accepting chemotaxis protein (NCBI ptt file)||208, 236|
|CAC2921||thiH||Thiamine biosynthesis enzyme, thiH (NCBI ptt file)||208, 363|
|CAC2923||CAC2923||Dinucleotide-utilizing enzyme involved in molybdopterin/thiamine biosynthesis (NCBI ptt file)||208, 363|
|CAC2924||thiS||Uncharacterized protein, possibly involved in thiamine biosynthesis (NCBI ptt file)||208, 336|
|CAC3275||CAC3275||Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats (NCBI ptt file)||22, 320|
|CAC3337||CAC3337||Predicted amidohodrolase (dihydroorotase family) (NCBI ptt file)||320, 347|
|CAC3415||CAC3415||ABC-type multidrug/protein/lipid transport system, ATPase component (NCBI ptt file)||123, 208|
|CAC3439||CAC3439||Uncharacterized conserved membrane protein, YGAE B.subtilis homolog (NCBI ptt file)||144, 320|
|CAC3475||CAC3475||Transcriptional regulator, merR family (NCBI ptt file)||14, 320|
|CAC3476||CAC3476||Methyl-accepting chemotaxis protein (NCBI ptt file)||208, 353|
|CAC3488||CAC3488||Predicted transcriptional regulator (NCBI ptt file)||69, 208|
|CAC3543||CAC3543||Predicted membrane protein (NCBI ptt file)||265, 320|
|CAC3554||CAC3554||Siderophore/Surfactin synthetase related protein (NCBI ptt file)||26, 208|
|CAC3654||CAC3654||Heavy-metal binding protein (similar to N-terminal domain of MerA) (NCBI ptt file)||73, 320|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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