Organism : Methanococcus maripaludis S2 | Module List :
Regulation information for MMP0015(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for MMP0015
|Gene||Common Name||Description||Module membership|
|MMP0014||truD||tRNA pseudouridine synthase D||66, 107|
|MMP0015||hypothetical protein MMP0015||66, 107|
|MMP0022||hypothetical protein MMP0022||13, 66|
|MMP0023||hypothetical protein MMP0023||13, 66|
|MMP0105||hypothetical protein MMP0105||4, 107|
|MMP0106||hypothetical protein MMP0106||107, 140|
|MMP0179||purL||phosphoribosylformylglycinamidine synthase||66, 143|
|MMP0212||glycyl-tRNA synthetase||81, 107|
|MMP0609||pth2||peptidyl-tRNA hydrolase||66, 140|
|MMP0637||ArsR family transcriptional regulator||24, 107|
|MMP0844||hypothetical protein MMP0844||66, 133|
|MMP0868||proV||ABC transporter ATPase||41, 66|
|MMP0873||hypothetical protein MMP0873||95, 107|
|MMP0917||dapF||diaminopimelate epimerase||107, 136|
|MMP0935||hypothetical protein MMP0935||107, 126|
|MMP0936||aroE||shikimate 5-dehydrogenase||66, 107|
|MMP0945||glyceraldehyde-3-phosphate ferredoxin oxidoreductase||66, 98|
|MMP1034||tmk||thymidylate kinase||66, 68|
|MMP1038||atpH||A1A0 ATPase subunit H||107, 135|
|MMP1039||atpI||V-type ATP synthase subunit I||107, 135|
|MMP1040||atpK||V-type ATP synthase subunit K||107, 135|
|MMP1041||atpE||A1A0 ATPase subunit IE||107, 135|
|MMP1042||atpC||V-type ATP synthase subunit C||107, 135|
|MMP1043||atpF||V-type ATP synthase subunit F||107, 135|
|MMP1044||atpA||V-type ATP synthase subunit A||107, 135|
|MMP1045||atpB||V-type ATP synthase subunit B||107, 135|
|MMP1046||atpD||V-type ATP synthase subunit D||107, 135|
|MMP1047||hypothetical protein MMP1047||107, 135|
|MMP1082||hisH||imidazole glycerol phosphate synthase subunit HisH||66, 143|
|MMP1090||NAD-dependent epimerase/dehydratase||66, 133|
|MMP1095||phosphate-binding protein||66, 89|
|MMP1096||phosphate ABC transporter inner membrane protein||66, 89|
|MMP1097||phosphate ABC transporter inner membrane protein||66, 89|
|MMP1098||pstB||phosphate ABC transporter ATP-binding protein||66, 89|
|MMP1099||phosphate transporter PhoU||66, 89, 95|
|MMP1171||pssA||CDP-diacylglycerol--serine O-phosphatidyltransferase||28, 66|
|MMP1190||FKBP-type peptidylprolyl isomerase||35, 107|
|MMP1219||putative dinG ATP-dependent helicase||95, 107|
|MMP1303||sensory transduction histidine kinase||4, 28, 66|
|MMP1337||hydrogenase maturation protease||95, 107|
|MMP1429||rpm||DNA-directed RNA polymerase subunit M||95, 107|
|MMP1454||ehaG||hypothetical protein MMP1454||66, 117, 133|
|MMP1455||ehaH||putative transmembrane subunit of a hydrogenase||66, 133|
|MMP1456||ehaI||hypothetical protein MMP1456||66, 117, 133|
|MMP1457||ehaJ||energy conserving hydrogenase A integral membrane subunit||66, 133|
|MMP1458||ehaK||hypothetical protein MMP1458||66, 133|
|MMP1459||ehaL||hypothetical protein MMP1459||66, 117, 133|
|MMP1460||ehaM||hypothetical protein MMP1460||66, 133|
|MMP1462||ehaO||energy conserving hydrogenase A large subunit||66, 133|
|MMP1464||ehaQ||hypothetical protein MMP1464||107, 133|
|MMP1465||ehaR||hypothetical protein MMP1465||107, 133|
|MMP1466||ehaS||putative CBS domain-containing signal transduction protein||95, 107, 133|
|MMP1531||hypothetical protein MMP1531||8, 66|
|MMP1662||cbiF||precorrin-4 C11-methyltransferase||66, 117|
|MMP1665||HEAT domain-containing protein||66, 117|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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Identity of gene members in a module may help to identify potential interactions between different functional modules. Therefore, neighbor genes that share the same module(s) with gene under consideration are shown here. For each memebr, gene name, description and modules that contain it are listed.
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