Organism : Methanococcus maripaludis S2 | Module List :
Regulation information for MMP0075(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for MMP0075
|Gene||Common Name||Description||Module membership|
|MMP0060||rplX||50S ribosomal protein LX||61, 96, 138|
|MMP0061||aIF6||translation initiation factor IF-6||8, 61, 96, 138|
|MMP0062||50S ribosomal protein L31e||61, 77, 96, 128, 138|
|MMP0075||abortive infection protein||96, 136|
|MMP0087||hmgA||hydroxymethylglutaryl-coenzyme A reductase:3-hydroxy-3-methylglutaryl coenzyme A reductase||39, 136|
|MMP0088||hemA||glutamyl-tRNA reductase||39, 136|
|MMP0163||arsA||arsenite-activated ATPase ArsA||16, 96|
|MMP0164||cbiX(s)||sirohydrochlorin cobaltochelatase||39, 136|
|MMP0242||hypothetical protein MMP0242||8, 39, 96|
|MMP0245||pfdB||prefoldin subunit beta||96, 138|
|MMP0317||hypothetical protein MMP0317||77, 96|
|MMP0350||hexapeptide repeat-containing transferase||80, 96|
|MMP0370||hypothetical protein MMP0370||77, 96|
|MMP0429||hypothetical protein MMP0429||64, 136|
|MMP0443||rps24e||30S ribosomal protein S24e||3, 51, 96, 97|
|MMP0572||slyD||FKBP-type peptidylprolyl isomerase||11, 96|
|MMP0578||aroQ||chorismate mutase||11, 18, 96, 138|
|MMP0644||cation diffusion facilitator family transporter||39, 136|
|MMP0645||mdh||malate dehydrogenase||8, 39, 136|
|MMP0646||hypothetical protein MMP0646||39, 136|
|MMP0657||hypothetical protein MMP0657||8, 29, 96|
|MMP0668||hypothetical protein MMP0668||3, 96, 105|
|MMP0874||SAM-binding motif-containing protein||39, 136|
|MMP0875||slpB||S layer protein||39, 136|
|MMP0887||stress responsive alpha-beta barrel domain-containing protein||40, 136|
|MMP0888||cobalt transport protein CbiN||39, 136|
|MMP0889||cobalt transport protein CbiM||39, 136|
|MMP0917||dapF||diaminopimelate epimerase||107, 136|
|MMP0946||gatB||aspartyl/glutamyl-tRNA amidotransferase subunit B||8, 81, 96|
|MMP0965||formylmethanofuran dehydrogenase subunit E-like protein||8, 39, 136|
|MMP1013||carB||carbamoyl-phosphate synthase large subunit||77, 96|
|MMP1035||hypothetical protein MMP1035||77, 136|
|MMP1036||hypothetical protein MMP1036||77, 136|
|MMP1113||transketoloase, C terminal half||96, 120|
|MMP1147||rpl37e||50S ribosomal protein L37e||18, 96, 138|
|MMP1175||hypothetical protein MMP1175||14, 136|
|MMP1176||putative iron transport system substrate-binding protein, N-term half||39, 136|
|MMP1177||putative iron transport system substrate-binding protein, C-term half||39, 136|
|MMP1178||periplasmic binding protein||39, 136|
|MMP1181||iron transport system binding protein||39, 136|
|MMP1182||transport system permease||39, 136|
|MMP1183||iron ABC transporter ATPase subunit||39, 136|
|MMP1208||aIF2_gamma||translation initiation factor IF-2 subunit gamma||20, 61, 96|
|MMP1254||purM||phosphoribosylaminoimidazole synthetase||96, 120|
|MMP1260||hypothetical protein MMP1260||40, 96|
|MMP1401||ef1B||elongation factor 1-beta||61, 96, 97, 105|
|MMP1403||rpl22p||50S ribosomal protein L22P||3, 61, 92, 96, 97, 105|
|MMP1433||rpl11p||50S ribosomal protein L11P||96, 97, 105|
|MMP1515||hsp60||chaperonin GroEL||77, 96|
|MMP1646||hypothetical protein MMP1646||96, 136|
|MMP1699||hypothetical protein MMP1699||77, 136|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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