Module 7 Residual: 0.55

Title Bicluster Model Residual Score
bicluster_0007 v02 0.55 -14.33
Displaying 1 - 18 of 18
Rv0212c Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)

Details for Rv0212c - Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)

GO Terms: GO:0052572

PATRIC Pathways: Nicotinate and nicotinamide metabolism, Nicotinate and nicotinamide metabolism

Essentiality: Griffin Essential: 0.83 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0212c

Tuberculist Genomic Region

Rv0213c POSSIBLE METHYLTRANSFERASE CLUSTERED WITH NadR

Details for Rv0213c - POSSIBLE METHYLTRANSFERASE CLUSTERED WITH NadR

GO Terms: GO:0005829, GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 1.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0213c

Tuberculist Genomic Region

Rv0214 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)

Details for Rv0214 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)

GO Terms: NA

PATRIC Pathways: Fatty acid metabolism

Essentiality: Griffin Essential: 0.99 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0214

Tuberculist Genomic Region

Rv0595c

Details for Rv0595c -

GO Terms: GO:0045926

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.98 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0595c

Tuberculist Genomic Region

Rv0596c

Details for Rv0596c -

GO Terms: GO:0015643, GO:0045927

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.08 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0596c

Tuberculist Genomic Region

Rv0653c Transcriptional regulator, TetR family

Details for Rv0653c - Transcriptional regulator, TetR family

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.72 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0653c

Tuberculist Genomic Region

Rv0654 \Lignostilbene-alpha,beta-dioxygenase and related enzymes\\\""

Details for Rv0654 - \Lignostilbene-alpha,beta-dioxygenase and related enzymes\\\""

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.97 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0654

Tuberculist Genomic Region

Rv1364c \Serine phosphatase RsbU, regulator of sigma subunit\\\""

Details for Rv1364c - \Serine phosphatase RsbU, regulator of sigma subunit\\\""

GO Terms: GO:0004721, GO:0004035, GO:0005515, GO:0030145

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.41 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1364c

Tuberculist Genomic Region

Rv1985c HTH-type transcriptional regulator

Details for Rv1985c - HTH-type transcriptional regulator

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.83 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1985c

Tuberculist Genomic Region

Rv1986 Transporter, LysE family

Details for Rv1986 - Transporter, LysE family

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.90 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1986

Tuberculist Genomic Region

Rv2516c

Details for Rv2516c -

GO Terms: GO:0005618, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.11 | In vitro Essential: 0.05 | In vivo Essential: NA

Go to Gene Page: Rv2516c

Tuberculist Genomic Region

Rv2517c

Details for Rv2517c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.83 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2517c

Tuberculist Genomic Region

Rv2686c D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)

Details for Rv2686c - D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)

GO Terms: GO:0015562

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.36 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2686c

Tuberculist Genomic Region

Rv2687c PROBABLE ANTIBIOTIC-TRANSPORT INTEGRAL MEMBRANE LEUCINE AND VALINE RICH PROTEIN ABC TRANSPORTER

Details for Rv2687c - PROBABLE ANTIBIOTIC-TRANSPORT INTEGRAL MEMBRANE LEUCINE AND VALINE RICH PROTEIN ABC TRANSPORTER

GO Terms: GO:0015562

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.09 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2687c

Tuberculist Genomic Region

Rv2688c ABC transporter, ATP-binding protein

Details for Rv2688c - ABC transporter, ATP-binding protein

GO Terms: GO:0015562

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.75 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2688c

Tuberculist Genomic Region

Rv3237c TrkA, Potassium channel

Details for Rv3237c - TrkA, Potassium channel

GO Terms: GO:0005886, GO:0052572

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.63 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3237c

Tuberculist Genomic Region

Rv3617 Epoxide hydrolase (EC 3.3.2.9)

Details for Rv3617 - Epoxide hydrolase (EC 3.3.2.9)

GO Terms: GO:0005886

PATRIC Pathways: Metabolism of xenobiotics by cytochrome P450

Essentiality: Griffin Essential: 0.99 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3617

Tuberculist Genomic Region

Rv3618 Limonene 1,2-monooxygenase

Details for Rv3618 - Limonene 1,2-monooxygenase

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.94 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3618

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 0.0000000091 e-value: 0.00042
Displaying 1 - 1 of 1
regulates 23 modules
Weight: 
0.25
up-regulates
Bifunctional uroporphyrinogen-III synthetase/response regulator domain protein
regulates 38 modules
Weight: 
0.21
up-regulates
Transcriptional regulator, ArsR family
regulates 25 modules
Weight: 
0.13
up-regulates
Transcriptional regulator, TetR family
regulates 12 modules
Weight: 
0.11
up-regulates
Mercuric resistance operon regulatory protein
regulates 12 modules
Weight: 
0.02
up-regulates
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
No enrichment
Displaying 1 - 14 of 14
GO:0052572 |

response to host immune response

GO:0005829 |

cytosol

GO:0005886 |

plasma membrane

GO:0045926 |

negative regulation of growth

GO:0015643 |

toxin binding

GO:0045927 |

positive regulation of growth

GO:0004721 |

phosphoprotein phosphatase activity

GO:0004035 |

alkaline phosphatase activity

GO:0005515 |

protein binding

GO:0030145 |

manganese ion binding

GO:0005618 |

cell wall

GO:0040007 |

growth

GO:0015562 |

efflux transmembrane transporter activity