Module 9 Residual: 0.64

Title Bicluster Model Residual Score
bicluster_0009 v02 0.64 -6.78
Displaying 1 - 10 of 10
Rv0215c Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

Details for Rv0215c - Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

GO Terms: GO:0004085

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.68 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0215c

Tuberculist Genomic Region

Rv0236c PROBABLE CONSERVED TRANSMEMBRANE PROTEIN

Details for Rv0236c - PROBABLE CONSERVED TRANSMEMBRANE PROTEIN

GO Terms: GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.04 | In vivo Essential: NA

Go to Gene Page: Rv0236c

Tuberculist Genomic Region

Rv1289

Details for Rv1289 -

GO Terms: GO:0005618

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.94 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1289

Tuberculist Genomic Region

Rv2438c NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase

Details for Rv2438c - NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase

GO Terms: GO:0003952, GO:0005618, GO:0005886, GO:0040007

PATRIC Pathways: Nitrogen metabolism, Nicotinate and nicotinamide metabolism

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.02 | In vivo Essential: NA

Go to Gene Page: Rv2438c

Tuberculist Genomic Region

Rv2528c Mrr restriction system protein

Details for Rv2528c - Mrr restriction system protein

GO Terms: GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.50 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2528c

Tuberculist Genomic Region

Rv2590 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)

Details for Rv2590 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)

GO Terms: GO:0004467, GO:0005829, GO:0005886

PATRIC Pathways: Fatty acid metabolism

Essentiality: Griffin Essential: 1.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2590

Tuberculist Genomic Region

Rv2885c Mobile element protein

Details for Rv2885c - Mobile element protein

GO Terms: GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.20 | In vitro Essential: NA | In vivo Essential: 0.39

Go to Gene Page: Rv2885c

Tuberculist Genomic Region

Rv3243c

Details for Rv3243c -

GO Terms: GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.63 | In vitro Essential: 0.09 | In vivo Essential: NA

Go to Gene Page: Rv3243c

Tuberculist Genomic Region

Rv3552 Putative CoA-transferase subunit beta Rv3552/MT3656 (EC 2.8.3.-)

Details for Rv3552 - Putative CoA-transferase subunit beta Rv3552/MT3656 (EC 2.8.3.-)

GO Terms: GO:0044117

PATRIC Pathways: Naphthalene and anthracene degradation, Geraniol degradation, Reductive carboxylate cycle (CO2 fixation)

Essentiality: Griffin Essential: 0.72 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3552

Tuberculist Genomic Region

Rv3566c Arylamine N-acetyltransferase (EC 2.3.1.5)

Details for Rv3566c - Arylamine N-acetyltransferase (EC 2.3.1.5)

GO Terms: GO:0004060, GO:0005886

PATRIC Pathways: Trinitrotoluene degradation, Caffeine metabolism, Drug metabolism - other enzymes

Essentiality: Griffin Essential: 0.83 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3566c

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 6300 e-value: 21000
Displaying 1 - 1 of 1
Transcriptional regulator, TetR family
regulates 8 modules
Weight: 
0.16
up-regulates
regulates 40 modules
Weight: 
0.15
up-regulates
DNA-binding response regulator, LuxR family
regulates 29 modules
Weight: 
0.14
up-regulates
regulates 43 modules
Weight: 
0.10
up-regulates
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
No enrichment
Displaying 1 - 9 of 9
GO:0004085 |

butyryl-CoA dehydrogenase activity

GO:0005886 |

plasma membrane

GO:0040007 |

growth

GO:0005618 |

cell wall

GO:0003952 |

NAD+ synthase (glutamine-hydrolyzing) activity

GO:0004467 |

long-chain fatty acid-CoA ligase activity

GO:0005829 |

cytosol

GO:0044117 |

growth of symbiont in host

GO:0004060 |

arylamine N-acetyltransferase activity