Module 110 Residual: 0.44

Title Bicluster Model Residual Score
bicluster_0110 v02 0.44 -17.17
Displaying 1 - 6 of 6
Rv1789 PPE family protein

Details for Rv1789 - PPE family protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.93 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1789

Tuberculist Genomic Region

Rv2115c Bacterial proteasome-activating AAA-ATPase (PAN)

Details for Rv2115c - Bacterial proteasome-activating AAA-ATPase (PAN)

GO Terms: GO:0005515, GO:0005886, GO:0010498, GO:0016887, GO:0051260, GO:0051409

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2115c

Tuberculist Genomic Region

Rv2116 Probable conserved lipoprotein lppK

Details for Rv2116 - Probable conserved lipoprotein lppK

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.78 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2116

Tuberculist Genomic Region

Rv2117 YlxP-like protein

Details for Rv2117 - YlxP-like protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.53 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2117

Tuberculist Genomic Region

Rv2130c L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC

Details for Rv2130c - L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC

GO Terms: GO:0004817, GO:0005886, GO:0010125, GO:0016049, GO:0035446, GO:0040007, GO:0004817

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.06 | In vivo Essential: NA

Go to Gene Page: Rv2130c

Tuberculist Genomic Region

Rv3238c PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN

Details for Rv3238c - PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.93 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3238c

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 1.3 e-value: 1100
Displaying 1 - 1 of 1
Transcriptional regulator, TetR family
regulates 8 modules
Weight: 
-0.16
down-regulates
Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system
regulates 24 modules
Weight: 
-0.15
down-regulates
\Transcriptional regulator, TetR family\\\""
regulates 32 modules
Weight: 
0.12
up-regulates
Transcriptional regulator, XRE family
regulates 6 modules
Weight: 
0.12
up-regulates
RNA polymerase sigma factor RpoE
regulates 30 modules
Weight: 
0.11
up-regulates
Nitrogen regulatory protein P-II
regulates 3 modules
Weight: 
0.11
up-regulates
Transcriptional regulator, MerR family
regulates 12 modules
Weight: 
0.10
up-regulates
WhiB family transcriptional regulator
regulates 6 modules
Weight: 
0.10
up-regulates
Heat shock protein 60 family chaperone GroEL
regulates 9 modules
Weight: 
-0.09
down-regulates
Iron-dependent repressor IdeR/DtxR
regulates 12 modules
Weight: 
0.09
up-regulates
Two-component response regulator
regulates 21 modules
Weight: 
0.09
up-regulates
Transcriptional regulatory protein
regulates 18 modules
Weight: 
0.08
up-regulates
Transcriptional regulator, TetR family
regulates 2 modules
Weight: 
-0.08
down-regulates
Transcriptional regulator, TetR family
regulates 12 modules
Weight: 
0.07
up-regulates
DNA-binding response regulator TrcR
regulates 4 modules
Weight: 
0.07
up-regulates
regulates 6 modules
Weight: 
0.07
up-regulates
Bifunctional uroporphyrinogen-III synthetase/response regulator domain protein
regulates 38 modules
Weight: 
0.05
up-regulates
Transcriptional regulator, TetR family
regulates 23 modules
Weight: 
0.05
up-regulates
RNA polymerase sigma-54 factor RpoN
regulates 27 modules
Weight: 
0.05
up-regulates
regulates 40 modules
Weight: 
0.05
up-regulates
Phosphate regulon transcriptional regulatory protein PhoB (SphR)
regulates 6 modules
Weight: 
0.04
up-regulates
CarD-like transcriptional regulator
regulates 5 modules
Weight: 
-0.03
down-regulates
regulates 22 modules
Weight: 
0.03
up-regulates
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
No enrichment
Displaying 1 - 12 of 12
GO:0005515 |

protein binding

GO:0005886 |

plasma membrane

GO:0010498 |

proteasomal protein catabolic process

GO:0016887 |

ATPase activity

GO:0051260 |

protein homooligomerization

GO:0051409 |

response to nitrosative stress

GO:0004817 |

cysteine-tRNA ligase activity

GO:0010125 |

mycothiol biosynthetic process

GO:0016049 |

cell growth

GO:0035446 |

cysteine-glucosaminylinositol ligase activity

GO:0040007 |

growth