Module 220 Residual: 0.49

Title Bicluster Model Residual Score
bicluster_0220 v02 0.49 -11.34
Displaying 1 - 15 of 15
Rv0376c CO dehydrogenases maturation factor, CoxF family

Details for Rv0376c - CO dehydrogenases maturation factor, CoxF family

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.93 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0376c

Tuberculist Genomic Region

Rv1039c PPE family protein

Details for Rv1039c - PPE family protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.53 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1039c

Tuberculist Genomic Region

Rv1731 Aldehyde dehydrogenase (EC 1.2.1.3) Rv1735c C4-dicarboxylate transporter/malic acid transport protein

Details for Rv1735c - C4-dicarboxylate transporter/malic acid transport protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.63 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1735c

Tuberculist Genomic Region

Rv1801 PPE family protein

Details for Rv1801 - PPE family protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.96 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1801

Tuberculist Genomic Region

Rv1989c

Details for Rv1989c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.95 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1989c

Tuberculist Genomic Region

Rv1990c

Details for Rv1990c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.05 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1990c

Tuberculist Genomic Region

Rv1991c

Details for Rv1991c -

GO Terms: GO:0008150, GO:0008150, GO:0004540, GO:0006402, GO:0045926, GO:0045927

PATRIC Pathways: NA

Essentiality: Griffin Essential: 0.95 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1991c

Tuberculist Genomic Region

Rv2558

Details for Rv2558 -

GO Terms: GO:0009267, GO:0009405

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.83 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2558

Tuberculist Genomic Region

Rv2631 Protein RtcB

Details for Rv2631 - Protein RtcB

GO Terms: GO:0003674, GO:0005576

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.94 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2631

Tuberculist Genomic Region

Rv2780 Alanine dehydrogenase (EC 1.4.1.1)

Details for Rv2780 - Alanine dehydrogenase (EC 1.4.1.1)

GO Terms: GO:0000286, GO:0001666, GO:0005576, GO:0005829, GO:0005886, GO:0051260

PATRIC Pathways: Taurine and hypotaurine metabolism, Alanine, aspartate and glutamate metabolism

Essentiality: Griffin Essential: 0.55 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2780

Tuberculist Genomic Region

Rv3359 NADH:flavin oxidoreductases, Old Yellow Enzyme family

Details for Rv3359 - NADH:flavin oxidoreductases, Old Yellow Enzyme family

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.99 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3359

Tuberculist Genomic Region

Rv0355c PPE family protein

Details for Rv0355c - PPE family protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 1.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0355c

Tuberculist Genomic Region

Rv1035c PROBABLE TRANSPOSASE (FRAGMENT)

Details for Rv1035c - PROBABLE TRANSPOSASE (FRAGMENT)

GO Terms: GO:0005618, GO:0005829, GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.27 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1035c

Tuberculist Genomic Region

Rv1734c

Details for Rv1734c -

GO Terms: GO:0004742

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.78 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1734c

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 9.8 e-value: 4900
Displaying 1 - 1 of 1
Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22)
regulates 6 modules
Weight: 
0.20
up-regulates
Transcriptional regulator, LuxR family
regulates 9 modules
Weight: 
0.17
up-regulates
Transcriptional regulator, ArsR family
regulates 28 modules
Weight: 
0.15
up-regulates
Two component transcriptional regulatory protein DevR
regulates 19 modules
Weight: 
0.13
up-regulates
Transcriptional regulator, AsnC family
regulates 7 modules
Weight: 
0.13
up-regulates
Transcriptional regulator, TetR family
regulates 12 modules
Weight: 
0.09
up-regulates
Transcriptional regulator, ArsR family
regulates 13 modules
Weight: 
0.08
up-regulates
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
No enrichment
Displaying 1 - 19 of 19
GO:0005886 |

plasma membrane

GO:0006099 |

tricarboxylic acid cycle

GO:0009013 |

succinate-semialdehyde dehydrogenase [NAD(P)+] activity

GO:0008150 |

biological_process

GO:0004540 |

ribonuclease activity

GO:0006402 |

mRNA catabolic process

GO:0045926 |

negative regulation of growth

GO:0045927 |

positive regulation of growth

GO:0009267 |

cellular response to starvation

GO:0009405 |

pathogenesis

GO:0003674 |

molecular_function

GO:0005576 |

extracellular region

GO:0000286 |

alanine dehydrogenase activity

GO:0001666 |

response to hypoxia

GO:0005829 |

cytosol

GO:0051260 |

protein homooligomerization

GO:0005618 |

cell wall

GO:0004742 |

dihydrolipoyllysine-residue acetyltransferase activity