Module 229 Residual: 0.54

Title Bicluster Model Residual Score
bicluster_0229 v02 0.54 -7.15
Displaying 1 - 17 of 17
Rv0706 LSU ribosomal protein L22p (L17e)

Details for Rv0706 - LSU ribosomal protein L22p (L17e)

GO Terms: GO:0003735, GO:0006412, GO:0005622, GO:0005840, GO:0005618, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.01 | In vitro Essential: 0.03 | In vivo Essential: NA

Go to Gene Page: Rv0706

Tuberculist Genomic Region

Rv0909

Details for Rv0909 -

GO Terms: GO:0045927

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.53 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0909

Tuberculist Genomic Region

Rv0910

Details for Rv0910 -

GO Terms: GO:0045926, GO:0004540

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.59 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0910

Tuberculist Genomic Region

Rv1500 Glycosyl transferase, family 2

Details for Rv1500 - Glycosyl transferase, family 2

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.01 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1500

Tuberculist Genomic Region

Rv2412 SSU ribosomal protein S20p

Details for Rv2412 - SSU ribosomal protein S20p

GO Terms: GO:0006412, GO:0003723, GO:0005622, GO:0003735, GO:0005840, GO:0005829, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.22 | In vitro Essential: 0.19 | In vivo Essential: NA

Go to Gene Page: Rv2412

Tuberculist Genomic Region

Rv2788 Mn-dependent transcriptional regulator MntR

Details for Rv2788 - Mn-dependent transcriptional regulator MntR

GO Terms: GO:0005506, GO:0003700

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.83 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2788

Tuberculist Genomic Region

Rv2843 PROBABLE CONSERVED TRANSMEMBRANE ALANINE RICH PROTEIN

Details for Rv2843 - PROBABLE CONSERVED TRANSMEMBRANE ALANINE RICH PROTEIN

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.06 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2843

Tuberculist Genomic Region

Rv3208 Transcriptional regulator, TetR family

Details for Rv3208 - Transcriptional regulator, TetR family

GO Terms: GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.01 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3208

Tuberculist Genomic Region

Rv3477 PE family protein

Details for Rv3477 - PE family protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.78 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3477

Tuberculist Genomic Region

Rv3820c Polyketide synthase associated protein papA2

Details for Rv3820c - Polyketide synthase associated protein papA2

GO Terms: GO:0008415, GO:0046506

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.09 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3820c

Tuberculist Genomic Region

Rv3852 POSSIBLE HISTONE-LIKE PROTEIN HNS

Details for Rv3852 - POSSIBLE HISTONE-LIKE PROTEIN HNS

GO Terms: GO:0003677, GO:0005887, GO:0042803

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.86 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3852

Tuberculist Genomic Region

Rv1111c INTEGRAL MEMBRANE PROTEIN (Rhomboid family)

Details for Rv1111c - INTEGRAL MEMBRANE PROTEIN (Rhomboid family)

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: NA | In vivo Essential: 0.34

Go to Gene Page: Rv1111c

Tuberculist Genomic Region

Rv1926c Immunogenic protein MPT63/MPB63 precursor

Details for Rv1926c - Immunogenic protein MPT63/MPB63 precursor

GO Terms: GO:0005576

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.68 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1926c

Tuberculist Genomic Region

Rv2049c

Details for Rv2049c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.63 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2049c

Tuberculist Genomic Region

Rv3005c Membrane protein 2, distant similarity to thiosulphate:quinone oxidoreductase DoxD

Details for Rv3005c - Membrane protein 2, distant similarity to thiosulphate:quinone oxidoreductase DoxD

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.93 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3005c

Tuberculist Genomic Region

Rv3172c

Details for Rv3172c -

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: 0.90 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3172c

Tuberculist Genomic Region

Rv3478 PPE family protein

Details for Rv3478 - PPE family protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.87 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3478

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 170 e-value: 860
Displaying 1 - 1 of 1
Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
regulates 90 modules
Weight: 
0.21
up-regulates
Transcriptional regulator, TetR family
regulates 32 modules
Weight: 
0.14
up-regulates
regulates 22 modules
Weight: 
0.14
up-regulates
response regulator
regulates 69 modules
Weight: 
0.13
up-regulates
regulates 43 modules
Weight: 
0.11
up-regulates
regulates 18 modules
Weight: 
0.10
up-regulates
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
No enrichment
Displaying 1 - 21 of 21
GO:0003735 |

structural constituent of ribosome

GO:0006412 |

translation

GO:0005622 |

intracellular

GO:0005840 |

ribosome

GO:0005618 |

cell wall

GO:0040007 |

growth

GO:0045927 |

positive regulation of growth

GO:0045926 |

negative regulation of growth

GO:0004540 |

ribonuclease activity

GO:0003723 |

RNA binding

GO:0005829 |

cytosol

GO:0005506 |

iron ion binding

GO:0003700 |

sequence-specific DNA binding transcription factor activity

GO:0005886 |

plasma membrane

GO:0008415 |

NA

GO:0046506 |

sulfolipid biosynthetic process

GO:0003677 |

DNA binding

GO:0005887 |

integral to plasma membrane

GO:0042803 |

protein homodimerization activity

GO:0005576 |

extracellular region