Module 354 Residual: 0.44

Title Bicluster Model Residual Score
bicluster_0354 v02 0.44 -12.55
Displaying 1 - 13 of 13
Rv0315 \Possible beta-1,3-glucanase\\\""

Details for Rv0315 - \Possible beta-1,3-glucanase\\\""

GO Terms: GO:0005576

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.75 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0315

Tuberculist Genomic Region

Rv0667 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)

Details for Rv0667 - DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)

GO Terms: GO:0003899, GO:0005618, GO:0005829, GO:0005886, GO:0040007

PATRIC Pathways: Purine metabolism, Pyrimidine metabolism

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.02 | In vivo Essential: NA

Go to Gene Page: Rv0667

Tuberculist Genomic Region

Rv0668 DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)

Details for Rv0668 - DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)

GO Terms: GO:0003899, GO:0005886, GO:0040007

PATRIC Pathways: Purine metabolism, Pyrimidine metabolism

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.02 | In vivo Essential: NA

Go to Gene Page: Rv0668

Tuberculist Genomic Region

Rv0682 SSU ribosomal protein S12p (S23e)

Details for Rv0682 - SSU ribosomal protein S12p (S23e)

GO Terms: GO:0005622, GO:0006412, GO:0003735, GO:0005840, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.02 | In vitro Essential: 0.06 | In vivo Essential: NA

Go to Gene Page: Rv0682

Tuberculist Genomic Region

Rv0683 SSU ribosomal protein S7p (S5e)

Details for Rv0683 - SSU ribosomal protein S7p (S5e)

GO Terms: GO:0003735, GO:0005840, GO:0005622, GO:0006412, GO:0005829, GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.08 | In vitro Essential: 0.11 | In vivo Essential: NA

Go to Gene Page: Rv0683

Tuberculist Genomic Region

Rv0684 Translation elongation factor G

Details for Rv0684 - Translation elongation factor G

GO Terms: GO:0006412, GO:0005525, GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.05 | In vivo Essential: NA

Go to Gene Page: Rv0684

Tuberculist Genomic Region

Rv0685 Translation elongation factor Tu

Details for Rv0685 - Translation elongation factor Tu

GO Terms: GO:0005525, GO:0006412, GO:0001666, GO:0005515, GO:0005618, GO:0005829, GO:0005886, GO:0010039, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.09 | In vivo Essential: NA

Go to Gene Page: Rv0685

Tuberculist Genomic Region

Rv0700 SSU ribosomal protein S10p (S20e)

Details for Rv0700 - SSU ribosomal protein S10p (S20e)

GO Terms: GO:0005840, GO:0006412, GO:0005622, GO:0003735, GO:0005515, GO:0005829, GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.05 | In vitro Essential: 0.10 | In vivo Essential: NA

Go to Gene Page: Rv0700

Tuberculist Genomic Region

Rv0701 LSU ribosomal protein L3p (L3e)

Details for Rv0701 - LSU ribosomal protein L3p (L3e)

GO Terms: GO:0005622, GO:0006412, GO:0005840, GO:0003735, GO:0005829, GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.03 | In vivo Essential: NA

Go to Gene Page: Rv0701

Tuberculist Genomic Region

Rv0702 LSU ribosomal protein L4p (L1e)

Details for Rv0702 - LSU ribosomal protein L4p (L1e)

GO Terms: GO:0005840, GO:0003735, GO:0005622, GO:0006412, GO:0005829, GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.04 | In vivo Essential: NA

Go to Gene Page: Rv0702

Tuberculist Genomic Region

Rv0704 LSU ribosomal protein L2p (L8e)

Details for Rv0704 - LSU ribosomal protein L2p (L8e)

GO Terms: GO:0003735, GO:0006412, GO:0005840, GO:0005622, GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.03 | In vivo Essential: NA

Go to Gene Page: Rv0704

Tuberculist Genomic Region

Rv0705 SSU ribosomal protein S19p (S15e)

Details for Rv0705 - SSU ribosomal protein S19p (S15e)

GO Terms: GO:0003735, GO:0006412, GO:0005840, GO:0005622, GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.22 | In vitro Essential: 0.03 | In vivo Essential: NA

Go to Gene Page: Rv0705

Tuberculist Genomic Region

Rv1649 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)

Details for Rv1649 - Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)

GO Terms: GO:0004826, GO:0005886, GO:0040007

PATRIC Pathways: Aminoacyl-tRNA biosynthesis

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.04 | In vivo Essential: NA

Go to Gene Page: Rv1649

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 580 e-value: 4500
Displaying 1 - 1 of 1
Transcriptional regulator, TetR family
regulates 9 modules
Weight: 
-0.24
down-regulates
Transcriptional regulator, XRE family
regulates 5 modules
Weight: 
-0.19
down-regulates
Transcriptional regulator, TetR family
regulates 16 modules
Weight: 
0.15
up-regulates
HTH-type transcriptional regulator BetI
regulates 16 modules
Weight: 
-0.14
down-regulates
regulates 4 modules
Weight: 
0.09
up-regulates
Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
regulates 90 modules
Weight: 
0.08
up-regulates
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
No enrichment
Displaying 1 - 15 of 15
GO:0005576 |

extracellular region

GO:0003899 |

DNA-directed RNA polymerase activity

GO:0005618 |

cell wall

GO:0005829 |

cytosol

GO:0005886 |

plasma membrane

GO:0040007 |

growth

GO:0005622 |

intracellular

GO:0006412 |

translation

GO:0003735 |

structural constituent of ribosome

GO:0005840 |

ribosome

GO:0005525 |

GTP binding

GO:0001666 |

response to hypoxia

GO:0005515 |

protein binding

GO:0010039 |

response to iron ion

GO:0004826 |

phenylalanine-tRNA ligase activity