Module 470 Residual: 0.49

Title Bicluster Model Residual Score
bicluster_0470 v02 0.49 -8.09
Displaying 1 - 12 of 12
Rv1156

Details for Rv1156 -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.78 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1156

Tuberculist Genomic Region

Rv2373c Chaperone protein DnaJ

Details for Rv2373c - Chaperone protein DnaJ

GO Terms: GO:0031072, GO:0006457, GO:0051082, GO:0040007, GO:0010468

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.01 | In vitro Essential: 0.14 | In vivo Essential: NA

Go to Gene Page: Rv2373c

Tuberculist Genomic Region

Rv3009c Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)

Details for Rv3009c - Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)

GO Terms: GO:0005886, GO:0040007

PATRIC Pathways: Aminoacyl-tRNA biosynthesis, Aminoacyl-tRNA biosynthesis

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.06 | In vivo Essential: NA

Go to Gene Page: Rv3009c

Tuberculist Genomic Region

Rv3430c Mobile element protein

Details for Rv3430c - Mobile element protein

GO Terms: GO:0005618

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.92 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3430c

Tuberculist Genomic Region

Rv3581c 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)

Details for Rv3581c - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)

GO Terms: GO:0008685, GO:0040007

PATRIC Pathways: Terpenoid backbone biosynthesis

Essentiality: Griffin Essential: 0.05 | In vitro Essential: 0.07 | In vivo Essential: NA

Go to Gene Page: Rv3581c

Tuberculist Genomic Region

Rv3582c 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)

Details for Rv3582c - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60)

GO Terms: GO:0050518, GO:0000287, GO:0002135, GO:0005886, GO:0008270, GO:0030145, GO:0040007, GO:0042803, GO:0050518

PATRIC Pathways: Terpenoid backbone biosynthesis

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.04 | In vivo Essential: NA

Go to Gene Page: Rv3582c

Tuberculist Genomic Region

Rv1178 N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17)

Details for Rv1178 - N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17)

GO Terms: GO:0009016, GO:0005886

PATRIC Pathways: Lysine biosynthesis

Essentiality: Griffin Essential: 0.73 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1178

Tuberculist Genomic Region

Rv1354c Sensory box/GGDEF family protein

Details for Rv1354c - Sensory box/GGDEF family protein

GO Terms: GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.75 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1354c

Tuberculist Genomic Region

Rv1908c Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7)

Details for Rv1908c - Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7)

GO Terms: GO:0004096, GO:0004601, GO:0005576, GO:0005829, GO:0005886, GO:0006979, GO:0016677, GO:0020037, GO:0042744, GO:0042803, GO:0070402, GO:0070404

PATRIC Pathways: Tryptophan metabolism, Phenylpropanoid biosynthesis, Methane metabolism, Methane metabolism, Phenylalanine metabolism

Essentiality: Griffin Essential: 0.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1908c

Tuberculist Genomic Region

Rv3222c

Details for Rv3222c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.03 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3222c

Tuberculist Genomic Region

Rv3223c RNA polymerase sigma-54 factor RpoN

Details for Rv3223c - RNA polymerase sigma-54 factor RpoN

GO Terms: GO:0005515, GO:0006950, GO:0006979, GO:0009408, GO:0034605, GO:0006355, GO:0051409, GO:0052572

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.61 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3223c

Tuberculist Genomic Region

Rv3346c

Details for Rv3346c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.63 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3346c

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 150 e-value: 8000
Displaying 1 - 1 of 1
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
No enrichment
Displaying 1 - 33 of 33
GO:0031072 |

heat shock protein binding

GO:0006457 |

protein folding

GO:0051082 |

unfolded protein binding

GO:0040007 |

growth

GO:0010468 |

regulation of gene expression

GO:0005886 |

plasma membrane

GO:0005618 |

cell wall

GO:0008685 |

2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity

GO:0050518 |

2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity

GO:0000287 |

magnesium ion binding

GO:0002135 |

CTP binding

GO:0008270 |

zinc ion binding

GO:0030145 |

manganese ion binding

GO:0042803 |

protein homodimerization activity

GO:0009016 |

succinyldiaminopimelate transaminase activity

GO:0004096 |

catalase activity

GO:0004601 |

peroxidase activity

GO:0005576 |

extracellular region

GO:0005829 |

cytosol

GO:0006979 |

response to oxidative stress

GO:0016677 |

oxidoreductase activity, acting on a heme group of donors, nitrogenous group as acceptor

GO:0020037 |

heme binding

GO:0042744 |

hydrogen peroxide catabolic process

GO:0070402 |

NADPH binding

GO:0070404 |

NADH binding

GO:0005515 |

protein binding

GO:0006950 |

response to stress

GO:0009408 |

response to heat

GO:0034605 |

cellular response to heat

GO:0006355 |

regulation of transcription, DNA-dependent

GO:0051409 |

response to nitrosative stress

GO:0052572 |

response to host immune response