Module 486 Residual: 0.55

Title Bicluster Model Residual Score
bicluster_0486 v02 0.55 -9.11
Displaying 1 - 12 of 12
Rv3416 Sporulation regulatory protein WhiD

Details for Rv3416 - Sporulation regulatory protein WhiD

GO Terms: GO:0005515, GO:0015035, GO:0051536, GO:0051539

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.92 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3416

Tuberculist Genomic Region

Rv0112 GDP-mannose 4,6 dehydratase (EC 4.2.1.47)

Details for Rv0112 - GDP-mannose 4,6 dehydratase (EC 4.2.1.47)

GO Terms: GO:0040007

PATRIC Pathways: Amino sugar and nucleotide sugar metabolism, Fructose and mannose metabolism

Essentiality: Griffin Essential: 0.03 | In vitro Essential: 0.09 | In vivo Essential: NA

Go to Gene Page: Rv0112

Tuberculist Genomic Region

Rv0113 Phosphoheptose isomerase (EC 5.3.1.-)

Details for Rv0113 - Phosphoheptose isomerase (EC 5.3.1.-)

GO Terms: GO:0005975, GO:0005529

PATRIC Pathways: Inositol phosphate metabolism, Galactose metabolism, Pentose and glucuronate interconversions, Biosynthesis of ansamycins

Essentiality: Griffin Essential: 0.34 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0113

Tuberculist Genomic Region

Rv0691c Mycofactocin system transcriptional regulator

Details for Rv0691c - Mycofactocin system transcriptional regulator

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.90 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0691c

Tuberculist Genomic Region

Rv0726c

Details for Rv0726c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.64 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0726c

Tuberculist Genomic Region

Rv1963c Transcriptional repressor Mce3R, TetR family

Details for Rv1963c - Transcriptional repressor Mce3R, TetR family

GO Terms: GO:0003700, GO:0045892, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.14 | In vitro Essential: 0.13 | In vivo Essential: NA

Go to Gene Page: Rv1963c

Tuberculist Genomic Region

Rv2871

Details for Rv2871 -

GO Terms: GO:0005886, GO:0045927

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.36 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2871

Tuberculist Genomic Region

Rv3016 Lipoprotein LpqA

Details for Rv3016 - Lipoprotein LpqA

GO Terms: GO:0005576

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.95 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3016

Tuberculist Genomic Region

Rv3033

Details for Rv3033 -

GO Terms: GO:0005576, GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.40 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3033

Tuberculist Genomic Region

Rv3047c

Details for Rv3047c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.71 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3047c

Tuberculist Genomic Region

Rv3048c Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)

Details for Rv3048c - Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1)

GO Terms: GO:0004748, GO:0005515, GO:0005971, GO:0009263, GO:0040007

PATRIC Pathways: Glutathione metabolism, Pyrimidine metabolism, Purine metabolism

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.19 | In vivo Essential: NA

Go to Gene Page: Rv3048c

Tuberculist Genomic Region

Rv3451 serine esterase, cutinase family

Details for Rv3451 - serine esterase, cutinase family

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.85 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3451

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 500 e-value: 840
Displaying 1 - 1 of 1
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
GO:0003677 | GO:0003676 DNA binding | nucleic acid binding
Displaying 1 - 16 of 16
GO:0005515 |

protein binding

GO:0015035 |

protein disulfide oxidoreductase activity

GO:0051536 |

iron-sulfur cluster binding

GO:0051539 |

4 iron, 4 sulfur cluster binding

GO:0040007 |

growth

GO:0005975 |

carbohydrate metabolic process

GO:0005529 |

NA

GO:0003700 |

sequence-specific DNA binding transcription factor activity

GO:0045892 |

negative regulation of transcription, DNA-dependent

GO:0005886 |

plasma membrane

GO:0045927 |

positive regulation of growth

GO:0005576 |

extracellular region

GO:0004748 |

ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor

GO:0005971 |

ribonucleoside-diphosphate reductase complex

GO:0009263 |

deoxyribonucleotide biosynthetic process