Rv0324 Transcriptional regulator, ArsR family

Rv0324 (Transcriptional regulator, ArsR family) is predicted to be co-regulated in modules bicluster_0498 with residual 0.51 and bicluster_0546 with residual 0.58.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.00 and 6.30 for bicluster_0498 and 0.00 and 0.21 for bicluster_0546 respectively.

These modules are enriched for following go terms: .

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 91 - 100 of 161
Gene Target Differential Expression Distance Expression pvalue Type
Glutamine synthetase type I (EC 6.3.1.2)
Repressed 0 -0.61 0.00000000000000101 Primary.TSS
Possible membrane protein
No -83 -0.48 0.0455502 CDS
NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18)
Repressed 61 -1.01 0.00000286 Internal.TSS
NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18)
Repressed 1 -1.01 0.00000286 CDS
Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly
Repressed -90 -1.1 0.000000000202 Primary.TSS
Heat-inducible transcription repressor HrcA
No -113 0.07 0.576125 Primary.TSS
putative sodium-dependent bicarbonate transporter
Repressed -5 -0.74 0.000000000805 Primary.TSS
SSU ribosomal protein S20p
Induced -27 0.83 0.000145097 Primary.TSS
Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
No 21 0.03 0.976263 Primary.TSS
Small-conductance mechanosensitive channel membrane protein
Induced 30 0.72 0.0000316 CDS
not assigned to any KEGG Pathway.
No TFOE experiment results were found

TRIP log2 fold abundance change

NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 9.75 U
D3I 3 3 3.83 9.21 I
D3U 3 3 3.83 9.54 U
D5I 9 5 6.00 9.00 I
D5U 17 5 6.00 11.09 U
D7I 18 7 8.14 6.42 I
D7U 19 7 8.14 8.94 U
D14I 4 14 15.63 3.03 I
D14U 4 14 15.63 6.75 U
D17I 3 17 19.15 I
D17U 3 17 19.15 5.68 U
D21I 4 21 23.23 1.11 I
D21U 4 21 23.23 5.41 U
D24I 3 24 26.60 I
D24U 3 24 26.60 5.48 U
D28I 4 28 30.61 1.11 I
D28U 4 28 30.61 4.81 U