Rv1255c Possible oxidoreductase subunit

Rv1255c (Possible oxidoreductase subunit) is predicted to be co-regulated in modules bicluster_0464 with residual 0.52 and bicluster_0497 with residual 0.53.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.03 and 2.20 for bicluster_0464 and 310.00 and 800.00 for bicluster_0497 respectively.

These modules are enriched for following go terms: 3-hydroxyacyl-CoA dehydrogenase activity.

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 11 - 20 of 33
Gene Target Differential Expression Distance Expression pvalue Type
Phage peptidoglycan binding endopeptidase
Repressed -8 -1.13 0.000000000184 Primary.TSS
Cytochrome P450 130
Repressed 3 -0.63 0.00120338 CDS
LSU ribosomal protein L31p
No -76 0.02 0.983658 Primary.TSS
Sensory box/GGDEF family protein
No -125 0.12 0.713725 Primary.TSS
Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)
No 19 0.02 0.95255 CDS
Integral membrane transport protein
No 46 0.11 0.803762 Primary.TSS
Transcriptional regulator, TetR family
No 4 -0.56 0.00301764 Primary.TSS
Cytochrome P450 144
No -30 0.08 0.693755 CDS
FIG055075: Possibly a cell division protein, antigen 84 in Mycobacteria
No 51 0.24 0.164303 Primary.TSS
Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)
No -44 -0.74 0.0559914 Primary.TSS
not assigned to any KEGG Pathway.
No TFOE experiment results were found
TRIP log2 fold abundance change
NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 9.84 U
D3I 3 3 3.83 8.00 I
D3U 3 3 3.83 8.49 U
D5I 9 5 6.00 9.49 I
D5U 17 5 6.00 11.09 U
D7I 18 7 8.14 7.05 I
D7U 19 7 8.14 10.18 U
D14I 4 14 15.63 2.76 I
D14U 4 14 15.63 8.01 U
D17I 3 17 19.15 I
D17U 3 17 19.15 7.82 U
D21I 4 21 23.23 1.11 I
D21U 4 21 23.23 7.68 U
D24I 3 24 26.60 I
D24U 3 24 26.60 7.96 U
D28I 4 28 30.61 I
D28U 4 28 30.61 7.73 U