Rv2324 Transcriptional regulator, AsnC family

Rv2324 (Transcriptional regulator, AsnC family) is predicted to be co-regulated in modules bicluster_0346 with residual 0.51 and bicluster_0420 with residual 0.47.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.00 and 0.14 for bicluster_0346 and 0.00 and 0.00 for bicluster_0420 respectively.

These modules are enriched for following go terms: .

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 31 - 40 of 128
Gene Target Differential Expression Distance Expression pvalue Type
Prevent host death protein, Phd antitoxin
No -67 -0.17 0.914758 CDS
Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
No -7 -0.55 0.00000363 Primary.TSS
Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
No -137 -0.29 0.784133 CDS
Substrate-binding region of ABC-type glycine betaine transport system
No -46 -0.16 0.837025 Primary.TSS
No -61 -0.39 0.561824 CDS
ATP synthase C chain (EC 3.6.3.14)
No -122 0.27 0.893296 Primary.TSS
Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)
No 16 0.04 0.982466 Primary.TSS
No -95 0.05 0.978693 CDS
Metal-dependent hydrolases of the beta-lactamase superfamily III
No -53 -0.38 0.0788095 CDS
Oxidoreductase
No -71 -0.03 0.980028 Primary.TSS
not assigned to any KEGG Pathway.
No TFOE experiment results were found
TRIP log2 fold abundance change
NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 12.79 U
D3I 3 3 3.83 12.85 I
D3U 3 3 3.83 13.00 U
D5I 9 5 6.00 13.44 I
D5U 17 5 6.00 14.02 U
D7I 18 7 8.14 11.63 I
D7U 19 7 8.14 12.96 U
D14I 4 14 15.63 5.04 I
D14U 4 14 15.63 12.17 U
D17I 3 17 19.15 3.15 I
D17U 3 17 19.15 11.85 U
D21I 4 21 23.23 7.99 I
D21U 4 21 23.23 12.32 U
D24I 3 24 26.60 I
D24U 3 24 26.60 12.06 U
D28I 4 28 30.61 4.59 I
D28U 4 28 30.61 12.59 U