Rv3736 Transcriptional regulator, AraC family

Rv3736 (Transcriptional regulator, AraC family) is predicted to be co-regulated in modules bicluster_0040 with residual 0.36 and bicluster_0185 with residual 0.52.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 1,400.00 and 3,700.00 for bicluster_0040 and 1,500.00 and 29,000.00 for bicluster_0185 respectively.

These modules are enriched for following go terms: .

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 31 - 40 of 70
Gene Target Differential Expression Distance Expression pvalue Type
Resuscitation-promoting factor RpfC
No -37 0.01 0.998054 Antisense.TSS
No -77 0.49 0.882522 Primary.TSS
Possible membrane protein
No -120 0.23 0.93638 Primary.TSS
PPE family protein
No -90 0.47 0.621795 Primary.TSS
YlxP-like protein
No -132 0.11 0.970191 CDS
Probable F420-dependent oxidoreductase family protein
No 21 -0.62 0.0982357 Primary.TSS
No -49 0.65 0.904758 Internal.TSS
NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18)
No 58 0.54 0.829718 Antisense.TSS
Transcriptional regulator, AsnC family
No 58 0.88 0.0930512 Primary.TSS
No -12 -0.38 0.93638 Primary.TSS
not assigned to any KEGG Pathway.
GO:0005576

extracellular region

extracellular region

Details: 
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
GO Category: 
cellular_component
272
Total items in this category:  
No TFOE experiment results were found

TRIP log2 fold abundance change

NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 13.23 U
D3I 3 3 3.83 12.83 I
D3U 3 3 3.83 12.87 U
D5I 9 5 6.00 14.35 I
D5U 17 5 6.00 14.39 U
D7I 18 7 8.14 12.81 I
D7U 19 7 8.14 12.36 U
D14I 4 14 15.63 9.51 I
D14U 4 14 15.63 11.57 U
D17I 3 17 19.15 7.47 I
D17U 3 17 19.15 11.22 U
D21I 4 21 23.23 6.92 I
D21U 4 21 23.23 11.51 U
D24I 3 24 26.60 3.20 I
D24U 3 24 26.60 11.01 U
D28I 4 28 30.61 5.25 I
D28U 4 28 30.61 11.27 U