Rv3736 Transcriptional regulator, AraC family

Rv3736 (Transcriptional regulator, AraC family) is predicted to be co-regulated in modules bicluster_0040 with residual 0.36 and bicluster_0185 with residual 0.52.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 1,400.00 and 3,700.00 for bicluster_0040 and 1,500.00 and 29,000.00 for bicluster_0185 respectively.

These modules are enriched for following go terms: .

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 61 - 70 of 70
Gene Target Differential Expression Distance Expression pvalue Type
Transcriptional regulator, AraC family
Induced -60 3.92 0 Antisense.TSS
membrane protein, putative
No -145 0.04 0.980043 CDS
UDP-galactopyranose mutase (EC 5.4.99.9)
No 38 0.03 0.987063 Primary.TSS
DNA-dependent DNA polymerase beta chain
Repressed -14 -1.38 0.000000000000101 Primary.TSS
Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
No 28 -0.57 0.00000193 Primary.TSS
FtsK/SpoIIIE family protein Rv3871, component of ESX-1 secretion system
No -72 -0.09 0.969662 Internal.TSS
PE family protein
No -123 -0.06 0.980852 Primary.TSS
No -33 0.1 0.946447 CDS
Esat-6 like protein EsxC
No -17 0.53 0.834626 CDS
No -8 -0.07 0.956347 Antisense.TSS
not assigned to any KEGG Pathway.
GO:0005576

extracellular region

extracellular region

Details: 
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
GO Category: 
cellular_component
272
Total items in this category:  
No TFOE experiment results were found

TRIP log2 fold abundance change

NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 13.23 U
D3I 3 3 3.83 12.83 I
D3U 3 3 3.83 12.87 U
D5I 9 5 6.00 14.35 I
D5U 17 5 6.00 14.39 U
D7I 18 7 8.14 12.81 I
D7U 19 7 8.14 12.36 U
D14I 4 14 15.63 9.51 I
D14U 4 14 15.63 11.57 U
D17I 3 17 19.15 7.47 I
D17U 3 17 19.15 11.22 U
D21I 4 21 23.23 6.92 I
D21U 4 21 23.23 11.51 U
D24I 3 24 26.60 3.20 I
D24U 3 24 26.60 11.01 U
D28I 4 28 30.61 5.25 I
D28U 4 28 30.61 11.27 U