Organism : Bacillus subtilis | Module List :
Regulation information for BSU12050(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for BSU12050
|Gene||Common Name||Description||Module membership|
|BSU01530||cwlD||N-acetylmuramoyl-L-alanine amidase (RefSeq)||33, 304|
|BSU01570||ybaN||polysaccharide deacetylase involved in sporulation (RefSeq)||16, 304|
|BSU01980||skfH||sibling killing effect ; sporulation killing factor biosynthesis and export (RefSeq)||141, 304|
|BSU02240||mpr||extracellular metalloprotease (RefSeq)||257, 304|
|BSU02600||cwlJ||cell wall hydrolase (RefSeq)||55, 127|
|BSU05710||ydhD||spore cortex lytic enzyme (RefSeq)||180, 304|
|BSU07140||yetF||hypothetical protein (RefSeq)||129, 304|
|BSU08980||yhbH||hypothetical protein (RefSeq)||126, 304|
|BSU10390||yhfW||putative Rieske [2Fe-2S] oxygenase (RefSeq)||304, 350|
|BSU10780||yisN||hypothetical protein (RefSeq)||85, 127|
|BSU10790||asnO||asparagine synthetase (RefSeq)||85, 127|
|BSU11390||appB||oligopeptide ABC transporter (permease) (RefSeq)||127, 407|
|BSU11400||appC||oligopeptide ABC transporter (permease) (RefSeq)||127, 407|
|BSU11410||yjbA||putative nucleic acid binding protein (RefSeq)||127, 411|
|BSU12050||yjdH||hypothetical protein (RefSeq)||127, 304|
|BSU12400||yjnA||putative integral inner membrane protein (RefSeq)||127, 302|
|BSU14320||yknU||putative ABC transporter (ATP-binding protein) (RefSeq)||257, 304|
|BSU14810||ylaK||putative phosphate starvation inducible protein (RefSeq)||16, 304|
|BSU15170||spoVD||penicillin-binding protein (RefSeq)||126, 304|
|BSU16720||ymxH||hypothetical protein (RefSeq)||16, 304|
|BSU16980||spoVS||regulator required for dehydratation of the spore core and assembly of the coat (stage V sporulation) (RefSeq)||304, 340|
|BSU17720||yndA||hypothetical protein (RefSeq)||286, 304|
|BSU18720||yoaR||putative factor for cell wall maintenance or synthesis (RefSeq)||96, 127|
|BSU19110||yobW||mother cell-specific membrane sporulation protein (RefSeq)||126, 127|
|BSU25600||comER||late competence protein ComER (RefSeq)||127, 304|
|BSU25760||spoIVCB||RNA polymerase sporulation-specific sigma factor (sigma-K) (N-terminal half) (RefSeq)||33, 127|
|BSU26780||yrdA||hypothetical protein (RefSeq)||304, 404|
|BSU27310||pbpI||penicillin-binding protein PBP4B (RefSeq)||304, 411|
|BSU27670||spoVB||putative putative translocase with flippase function for teichoic acid synthesis; involved in spore cortex synthesis (stage V sporulation) (RefSeq)||127, 239|
|BSU27810||yrbD||sodium/proton-dependent alanine transporter (RefSeq)||64, 304|
|BSU29160||ytvI||putative permease (RefSeq)||16, 304|
|BSU29260||ytpI||hypothetical protein (RefSeq)||91, 304|
|BSU29910||ytzH||hypothetical protein (RefSeq)||127, 239|
|BSU30710||ythA||putative cytochrome d oxidase subunit (RefSeq)||127, 282|
|BSU30950||glgA||glycogen synthase (RefSeq)||126, 304|
|BSU30980||glgB||glycogen branching enzyme (RefSeq)||141, 304|
|BSU31730||yuzC||inner spore coat protein (RefSeq)||16, 304|
|BSU32270||yutH||spore coat-associated protein (RefSeq)||127, 239|
|BSU33050||gerAA||component of the GerA germination receptor (RefSeq)||96, 127|
|BSU33060||gerAB||component of the germination receptor GerA (RefSeq)||96, 127|
|BSU33070||gerAC||component of the germination receptor GerA (RefSeq)||96, 127|
|BSU36550||spoIIQ||forespore protein required for alternative engulfment (RefSeq)||16, 304|
|BSU36750||spoIID||autolysin required for complete dissolution of the asymmetric septum (stage II sporulation) (RefSeq)||220, 304|
|BSU37690||ywfG||transaminase (RefSeq)||127, 302|
|BSU37700||bacE||efflux protein for bacilysin excretion, self-protection against bacilysin (RefSeq)||127, 302|
|BSU37710||bacD||alanine-anticapsin ligase (RefSeq)||127, 302|
|BSU37720||bacC||bacilysin biosynthesis oxidoreductase (RefSeq)||127, 302|
|BSU37730||bacB||isomerase component of bacilysin synthetase (RefSeq)||127, 302|
|BSU38350||ywbE||hypothetical protein (RefSeq)||127, 161|
|BSU40950||yyaC||hypothetical protein (RefSeq)||16, 304|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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