In vitro growth

Comparison of the expression profiles of the 630E strain after 8h, 14h and 38h of infection in mouse

Series: GSE43303,GSE43305 Pubmed ID: 23897605 | Type: Expression profiling by array

Overall Design:Transcriptional profiling of the C. difficile 630E strain after 8h, 14h or 38h of infection in mouse.; Three-condition experiments: 630E strain 8h, 14h or 38h of infection in mouse vs. 630E strain 8h in culture. 4 biological replicates for each condition in dye swap.

There are 113 items in this group

Module_43 - Residual: 0.44 Type: Module
Motif 1: e-value: 0.0000000000018
Motif 2: e-value:
1st Quintile: In vivo vs. In vitro
5th Quintile: In vitro growth
Module_42 - Residual: 0.38 Type: Module
Motif 1: e-value: 0.000028
Motif 2: e-value: 0.11
1st Quintile:
5th Quintile: In vitro growth
Module_41 - Residual: 0.46 Type: Module
Motif 1: e-value: 0.0000000032
Motif 2: e-value:
1st Quintile: In vitro growth
5th Quintile:
Module_40 - Residual: 0.49 Type: Module
Motif 1: e-value: 0.00028
Motif 2: e-value: 2.7
1st Quintile:
5th Quintile: In vitro growth
Module_36 - Residual: 0.49 Type: Module
Motif 1: e-value: 1.3e-22
Motif 2: e-value: 2.5e-19
1st Quintile:
5th Quintile: In vitro growth
Module_30 - Residual: 0.46 Type: Module
Motif 1: e-value: 0.000000000000032
Motif 2: e-value:
1st Quintile: In vitro growth
5th Quintile:
Module_29 - Residual: 0.49 Type: Module
Motif 1: e-value: 0.000037
Motif 2: e-value: 0.000066
1st Quintile:
5th Quintile: In vitro growth
Module_24 - Residual: 0.51 Type: Module
Motif 1: e-value: 0.000009
Motif 2: e-value:
1st Quintile:
5th Quintile: In vitro growth
Module_22 - Residual: 0.58 Type: Module
Motif 1: e-value: 0.000000000004
Motif 2: e-value:
1st Quintile: In vitro growth
5th Quintile:
Module_14 - Residual: 0.45 Type: Module
Motif 1: e-value: 0.0000000015
Motif 2: e-value: 0.05
1st Quintile:
5th Quintile: In vitro growth