In vivo vs. In vitro | C. diff Portal

Comparison of the expression profiles of the 630E strain after 8h, 14h and 38h of infection in mouse

Series: GSE43303,GSE43305 | Pubmed ID: 23897605 | Type: Expression profiling by array

Overall Design:Transcriptional profiling of the C. difficile 630E strain after 8h, 14h or 38h of infection in mouse.; Three-condition experiments: 630E strain 8h, 14h or 38h of infection in mouse vs. 630E strain 8h in culture. 4 biological replicates for each condition in dye swap.

There are 125 items in this group

Module_276 - Residual: 0.52 Type: Module

Motif 1:

e-value: 0.00000036

Motif 2: e-value:

1st Quintile: In vivo vs. In vitro
5th Quintile:

Module_273 - Residual: 0.49 Type: Module

Motif 1:

e-value: 0.08

Motif 2: e-value:

1st Quintile:
5th Quintile: In vivo vs. In vitro

Module_271 - Residual: 0.54 Type: Module

Motif 1:

e-value: 0.5

Motif 2: e-value:

1st Quintile:
5th Quintile: In vivo vs. In vitro

Module_269 - Residual: 0.49 Type: Module

Motif 1:

e-value: 0.0000057

Motif 2:

e-value: 0

1st Quintile: In vivo vs. In vitro
5th Quintile:

Module_266 - Residual: 0.60 Type: Module

Motif 1:

e-value: 0.01

Motif 2: e-value:

1st Quintile:
5th Quintile: In vivo vs. In vitro

Module_261 - Residual: 0.59 Type: Module

Motif 1:

e-value: 0

Motif 2: e-value:

1st Quintile: Sporulation
5th Quintile: In vivo vs. In vitro

Module_256 - Residual: 0.53 Type: Module

Motif 1:

e-value: 0.11

Motif 2: e-value:

1st Quintile: Exponential to stationary phase
5th Quintile: In vivo vs. In vitro

Module_255 - Residual: 0.35 Type: Module

Motif 1:

e-value: 0

Motif 2:

e-value: 0

1st Quintile: In vivo vs. In vitro
5th Quintile: In vitro growth

Module_253 - Residual: 0.53 Type: Module

Motif 1:

e-value: 0.59

Motif 2: e-value:

1st Quintile: In vivo vs. In vitro
5th Quintile:

Module_252 - Residual: 0.29 Type: Module

Motif 1: e-value:

Motif 2: e-value:

1st Quintile: In vivo vs. In vitro
5th Quintile:

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