In vivo vs. In vitro | C. diff Portal

Comparison of the expression profiles of the 630E strain after 8h, 14h and 38h of infection in mouse

Series: GSE43303,GSE43305 | Pubmed ID: 23897605 | Type: Expression profiling by array

Overall Design:Transcriptional profiling of the C. difficile 630E strain after 8h, 14h or 38h of infection in mouse.; Three-condition experiments: 630E strain 8h, 14h or 38h of infection in mouse vs. 630E strain 8h in culture. 4 biological replicates for each condition in dye swap.

There are 125 items in this group

Module_189 - Residual: 0.51 Type: Module

Motif 1:

e-value: 0.25

Motif 2: e-value:

1st Quintile: In vivo vs. In vitro
5th Quintile: In vitro growth

Module_188 - Residual: 0.58 Type: Module

Motif 1: e-value:

Motif 2: e-value:

1st Quintile: In vivo vs. In vitro
5th Quintile:

Module_185 - Residual: 0.55 Type: Module

Motif 1: e-value:

Motif 2: e-value:

1st Quintile: In vivo vs. In vitro
5th Quintile:

Module_184 - Residual: 0.37 Type: Module

Motif 1: e-value:

Motif 2: e-value:

1st Quintile: In vivo vs. In vitro
5th Quintile: In vitro growth

Module_178 - Residual: 0.54 Type: Module

Motif 1:

e-value: 0.04

Motif 2: e-value:

1st Quintile: In vivo vs. In vitro
5th Quintile: In vitro growth

Module_173 - Residual: 0.59 Type: Module

Motif 1: e-value:

Motif 2: e-value:

1st Quintile: In vitro growth
5th Quintile: In vivo vs. In vitro

Module_170 - Residual: 0.62 Type: Module

Motif 1:

e-value: 9e-28

Motif 2:

e-value: 0.00000033

1st Quintile: In vivo vs. In vitro
5th Quintile:

Module_167 - Residual: 0.51 Type: Module

Motif 1:

e-value: 0.00000029

Motif 2: e-value:

1st Quintile: Sporulation
5th Quintile: In vivo vs. In vitro

Module_165 - Residual: 0.40 Type: Module

Motif 1: e-value:

Motif 2: e-value:

1st Quintile: fur knockout
5th Quintile: In vivo vs. In vitro

Module_164 - Residual: 0.53 Type: Module

Motif 1:

e-value: 0.12

Motif 2: e-value:

1st Quintile:
5th Quintile: In vivo vs. In vitro

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