CD630_12750 codY

Putative TF-module interactions are defined using hyper-geometric tests to evaluate the significance of the overlap between modules and manually compiled TF regulons. Only modules with overlap of five or more genes with the corresponding regulons, and associated adjusted p-values <= 0.05 were considered enriched.

* Given that translation start was used to define the 3' end of putative promoters, some cis-regulatory motifs are likely to be ribosome binding sites (i.e., Shine-Dalgarno sequence). RBS is typically a six nucleotide sequence 5'-GGAGGA-3'.