Cre12.g523000.t1.1 zinc finger protein 1

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g523000.t1.1 chromosome_12 zinc finger protein 1 CDS 4638323 4642774 + 4 451

Phytozome

Locus Genomic View Functional Annotation
Cre12.g523000.t1.1 Cre12.g523000.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g12879.t1 Not available 30793529 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0082
motif_0082_1

motif_0082_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000043
Motif Bicluster: 
bicluster_0082
Width: 
19
Number of Sites: 
1
Consensus: 
CgTgATAAcgTgtAcaTaT
motif_0082_2

motif_0082_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
63
Motif Bicluster: 
bicluster_0082
Width: 
24
Number of Sites: 
1
Consensus: 
CCCACAaGCagAactAGgGGcCAc
 0.23
bicluster_0129
motif_0129_1

motif_0129_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.011
Motif Bicluster: 
bicluster_0129
Width: 
15
Number of Sites: 
1
Consensus: 
TTGtTTgTGcTgTtt
motif_0129_2

motif_0129_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.019
Motif Bicluster: 
bicluster_0129
Width: 
24
Number of Sites: 
1
Consensus: 
AcgagGnaCATAtgTGCAnatTAT
 0.18

GO Terms

GO:0046872 -

metal ion binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any metal ion.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

Interaction Target Module Weight
up-regulates bicluster_0027 0.06
up-regulates bicluster_0035 0.05
down-regulates bicluster_0037 0.05
down-regulates bicluster_0045 0.03
down-regulates bicluster_0053 0.05
down-regulates bicluster_0054 0.06
up-regulates bicluster_0059 0.05
up-regulates bicluster_0067 0.07
down-regulates bicluster_0087 0.04
down-regulates bicluster_0095 0.04
up-regulates bicluster_0098 0.06
down-regulates bicluster_0099 0.04
down-regulates bicluster_0102 0.03
down-regulates bicluster_0142 0.05
down-regulates bicluster_0149 0.05
down-regulates bicluster_0170 0.03
down-regulates bicluster_0172 0.05
up-regulates bicluster_0175 0.05
down-regulates bicluster_0185 0.07
down-regulates bicluster_0193 0.06
down-regulates bicluster_0211 0.06

String Network

Link to STRING STRING Network

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