11114 UPF0004
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11114 chr_19a_19 UPF0004 182552 183854 - UPF0004

Synonyms

NCBI ID Ensembl Genomes exon ID
7446277 Thaps11114.2, Thaps11114.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0267

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0097
 0.39

Most Highly Correlated Transcripts

3189

hypothetical protein
0.8568

bd875

(bd875) NA
0.8555

bd1221

(bd1221) recQ_fam
0.8544

19034

HSP70_NBD
0.8425

bd1092

(bd1092) NA
0.8419

11434

hypothetical protein
0.8412

19899

Bromodomain superfamily
0.8334

261258

(ZFP7) PHD
0.8313

17271

FtsJ
0.8299

993

PROCN superfamily
0.8294

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UPF0004 superfamily Uncharacterized protein family UPF0004; This family is the N terminal half of the Prosite family.... - 69.0669 7.67E-15 249 - 339 superfamily 250224
UPF0004 superfamily Uncharacterized protein family UPF0004; This family is the N terminal half of the Prosite family.... - 69.0669 7.67E-15 249 - 339 superfamily 250224

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 152651 159994 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016853 -

GO:0016853

isomerase activity

Details: 
Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
GO Category: 
MF

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